HHsearch alignment for GI: 254780701 and conserved domain: pfam10090
>pfam10090 DUF2328 Uncharacterized protein conserved in bacteria (DUF2328). Members of this family of hypothetical bacterial proteins have no known function.
Probab=96.59 E-value=0.096 Score=33.85 Aligned_cols=170 Identities=16% Similarity=0.139 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999985033687893789999999999999999999999999874220015653101199999999999999997
Q gi|254780701|r 265 NAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYELSESAISLIDIVRECIIMLQLRAQ 344 (495)
Q Consensus 265 ~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~l~~~~v~L~~li~~~~~~~~~~A~ 344 (495)
T Consensus 2 GAI~NGLELL~~~~~-----~~~~~~m~LI~~Sa~~A~----aRl~F~RlAfGaag-~~~~i~~~e~~~~~~~~~----~ 67 (181)
T pfam10090 2 GAIVNGLELLDDEGD-----PEMGPEMALIRESARNAS----ARLRFFRLAFGAAG-AGQQIDLAEAKSVLEGYL----A 67 (181)
T ss_pred CCHHHHHHHHCCCCC-----CCCHHHHHHHHHHHHHHH----HHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHH----H
T ss_conf 312555888707898-----641689999999999999----99999999808468-888569999999999998----3
Q ss_pred HCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEECCCCC--CHHHHHHHCC
Q ss_conf 31122100036761010479899998877765568860679887999999976985999998789978--9878544226
Q gi|254780701|r 345 EKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIKDNGPGI--AEGEIPTVLT 422 (495)
Q Consensus 345 ~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~DtG~GI--~~e~~~~iF~ 422 (495)
T Consensus 68 ~~r~~l~W~~~~~--~~---~k~~vklllnl~l~~~~AlprGG~i~V~~~-~~~~-~~~~v~a~g~r~~~~~~~~~~L~g 140 (181)
T pfam10090 68 GGRITLDWQLERD--LL---PKPEVKLLLNLLLIAEDALPRGGEIDVGEG-SDGA-GGWRVTAEGERLRIDPDLWAALAG 140 (181)
T ss_pred CCCEEEEECCCCC--CC---CHHHHHHHHHHHHHHHHHCCCCCEEEEEEE-CCCC-CEEEEEEEECCCCCCHHHHHHHCC
T ss_conf 8853898358745--48---879999999999999975477877899984-1789-759999970467899789998569
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 523157776789998880589999999961985999979
Q gi|254780701|r 423 SFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSK 461 (495)
Q Consensus 423 ~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~ 461 (495)
T Consensus 141 ~~------~~~~l~~~~VQ~~~l~~la~~~G~~l~~~~~ 173 (181)
T pfam10090 141 GA------PEEELDARNVQFYLLPLLAREAGGTLSYEIT 173 (181)
T ss_pred CC------CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 99------8778998764999999999986991178864