HHsearch alignment for GI: 254780701 and conserved domain: pfam10090

>pfam10090 DUF2328 Uncharacterized protein conserved in bacteria (DUF2328). Members of this family of hypothetical bacterial proteins have no known function.
Probab=96.59  E-value=0.096  Score=33.85  Aligned_cols=170  Identities=16%  Similarity=0.139  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             99999999985033687893789999999999999999999999999874220015653101199999999999999997
Q gi|254780701|r  265 NAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYELSESAISLIDIVRECIIMLQLRAQ  344 (495)
Q Consensus       265 ~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~l~~~~v~L~~li~~~~~~~~~~A~  344 (495)
T Consensus         2 GAI~NGLELL~~~~~-----~~~~~~m~LI~~Sa~~A~----aRl~F~RlAfGaag-~~~~i~~~e~~~~~~~~~----~   67 (181)
T pfam10090         2 GAIVNGLELLDDEGD-----PEMGPEMALIRESARNAS----ARLRFFRLAFGAAG-AGQQIDLAEAKSVLEGYL----A   67 (181)
T ss_pred             CCHHHHHHHHCCCCC-----CCCHHHHHHHHHHHHHHH----HHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHH----H
T ss_conf             312555888707898-----641689999999999999----99999999808468-888569999999999998----3


Q ss_pred             HCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEECCCCC--CHHHHHHHCC
Q ss_conf             31122100036761010479899998877765568860679887999999976985999998789978--9878544226
Q gi|254780701|r  345 EKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIKDNGPGI--AEGEIPTVLT  422 (495)
Q Consensus       345 ~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~DtG~GI--~~e~~~~iF~  422 (495)
T Consensus        68 ~~r~~l~W~~~~~--~~---~k~~vklllnl~l~~~~AlprGG~i~V~~~-~~~~-~~~~v~a~g~r~~~~~~~~~~L~g  140 (181)
T pfam10090        68 GGRITLDWQLERD--LL---PKPEVKLLLNLLLIAEDALPRGGEIDVGEG-SDGA-GGWRVTAEGERLRIDPDLWAALAG  140 (181)
T ss_pred             CCCEEEEECCCCC--CC---CHHHHHHHHHHHHHHHHHCCCCCEEEEEEE-CCCC-CEEEEEEEECCCCCCHHHHHHHCC
T ss_conf             8853898358745--48---879999999999999975477877899984-1789-759999970467899789998569


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEE
Q ss_conf             523157776789998880589999999961985999979
Q gi|254780701|r  423 SFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSK  461 (495)
Q Consensus       423 ~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~  461 (495)
T Consensus       141 ~~------~~~~l~~~~VQ~~~l~~la~~~G~~l~~~~~  173 (181)
T pfam10090       141 GA------PEEELDARNVQFYLLPLLAREAGGTLSYEIT  173 (181)
T ss_pred             CC------CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             99------8778998764999999999986991178864