HHsearch results for GI: 254780701 and protein with PDBid: 1b3q_A
>1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi- domains protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A*
Probab=99.94 E-value=9.2e-26 Score=237.90 Aligned_cols=204 Identities=20% Similarity=0.233 Sum_probs=160.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 98899999776420138999999999850336878937899999999999999999999999998742200156531011
Q gi|254780701|r 248 AKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYELSESAIS 327 (495)
Q Consensus 248 ~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~l~~~~v~ 327 (495)
+|-++|.|++|||.++.+.+. +.+.+ .. .+.+.++.++|.+++++++|..+- .+.++
T Consensus 9 ~~ld~l~n~~gEL~~~~~~l~---~~~~~-----~~-------~~~l~~~~~~l~~l~~~L~~~~~~--------~r~~~ 65 (379)
T 1b3q_A 9 EKLDNLMDLMGELVIARSRIL---ETLKK-----YN-------IKELDESLSHLSRITLDLQNVVMK--------IRMVP 65 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HTTSS-----CC-------CHHHHHHHHHHHHHHHHHHHHHHH--------HHEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHH-----HH-------HHHHHHHHHHHHHHHHHHHHHHHH--------HCCCC
T ss_conf 999999999987999898889---99887-----67-------999999999999999999998757--------25011
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEECCCCC-CHHCCCCHHHHHHHHHHHHHHHHHCCCCC------------CEEEEEEE
Q ss_conf 999999999999999973112210003676-10104798999988777655688606798------------87999999
Q gi|254780701|r 328 LIDIVRECIIMLQLRAQEKNIEIFQKIDPS-LSSVWADEKGMRQVILNLLSNAVKFTAIG------------GRVHVTVG 394 (495)
Q Consensus 328 L~~li~~~~~~~~~~A~~~~~~l~~~~~~~-~~~v~~D~~~L~qvl~NLi~NAiK~T~~g------------G~V~v~~~ 394 (495)
+.++++.+.......++.++..+.+....+ .....+|..+|+|++.||+.||+||++++ |.+.+.+.
T Consensus 66 l~~~~~~~~~~v~~~a~~~~~~v~l~~~~~~~~~~~~~~~~l~~~l~~Ll~Na~~~~~e~~~~r~~~~~~~~~~i~~~~~ 145 (379)
T 1b3q_A 66 ISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSAR 145 (379)
T ss_dssp THHHHTTHHHHHHHHHHHTTCCEEEEEECTTCEEEHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHTTCCSSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEE
T ss_conf 99999999999999999719969999758873256002999999999998777764347862898864035553037999
Q ss_pred EECCCEEEEEEEECCCCCCHHH------------------------HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9769859999987899789878------------------------5442265231577767899988805899999999
Q gi|254780701|r 395 WTSGRGQYISIKDNGPGIAEGE------------------------IPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMA 450 (495)
Q Consensus 395 ~~~~~~~~i~V~DtG~GI~~e~------------------------~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve 450 (495)
. .++.+.++++|+|+||+++. .+.+|+||+... +..+..+|+||||+|||++++
T Consensus 146 ~-~~~~i~i~~~d~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~s~~-~~~~~~~G~GLGL~ivk~ive 223 (379)
T 1b3q_A 146 H-EGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFSTK-EKVSEVSGRGVGMDVVKNVVE 223 (379)
T ss_dssp E-ETTEEEEEEEECSCCCCHHHHHHHHHHSSSCCSTTTTTSCTHHHHSGGGSTTCC------------CCCSHHHHHHHH
T ss_pred E-CCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCC-CCCCCCCCCCCCHHHHHHHHH
T ss_conf 7-49879999940687766434412589840222323455467899776532464434-320137999614999999999
Q ss_pred HCCCEEEEEEECCCCEEEEEEECHHH
Q ss_conf 61985999979899529889847247
Q gi|254780701|r 451 NHGGQFLIRSKLREGVEVIAILPNTR 476 (495)
Q Consensus 451 ~hgG~i~v~S~~G~Gt~f~v~LP~~~ 476 (495)
+|||+|+++|+||+||+|+++||...
T Consensus 224 ~hgG~I~V~S~~G~GTtF~i~lP~~~ 249 (379)
T 1b3q_A 224 SLNGSMGIESEKDKGTKVTIRLPLTL 249 (379)
T ss_dssp HTTCEEEEEEETTTEEEEEEEEESSC
T ss_pred HHCCEEEEEEECCCCEEEEEEEEEEH
T ss_conf 83887999961898889999996413