HHsearch results for GI: 254780701 and protein with PDBid: 1h7s_A
>1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A*
Probab=97.45 E-value=0.001 Score=48.88 Aligned_cols=87 Identities=14% Similarity=0.161 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCC-----CCCCC-CCCCCC
Q ss_conf 999887776556886067988799999997698599999878997898785442265231577-----76789-998880
Q gi|254780701|r 367 GMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSI-----AIKSA-EQGVGL 440 (495)
Q Consensus 367 ~L~qvl~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~-----~~~~~-~~GtGL 440 (495)
.+.+++.-||.||+..- + ..|.|.+. .+|.-.|+|+|+|.||++++++.++.+++...- -.+.. .|--|-
T Consensus 34 ~~~svvkELieNSiDA~-A-t~I~I~v~--~~g~~~I~V~DnG~Gi~~~dl~~~~~~~~tsk~~~~~d~~~~~t~GfRGe 109 (365)
T 1h7s_A 34 SLSTAVKELVENSLDAG-A-TNIDLKLK--DYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGE 109 (365)
T ss_dssp CHHHHHHHHHHHHHHTT-C-SEEEEEEE--GGGTSEEEEEECSCCCCGGGSGGGGC----------CCTTCSEEESSSSS
T ss_pred CHHHHHHHHHHHHHCCC-C-CEEEEEEE--CCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 88899999997787289-8-88999998--79843899998998759899864542023677662336533455774227
Q ss_pred HHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 5899999999619859999798
Q gi|254780701|r 441 GLPIAQSIMANHGGQFLIRSKL 462 (495)
Q Consensus 441 GLaIvk~lve~hgG~i~v~S~~ 462 (495)
+|+=...+ +++.+.|+.
T Consensus 110 aL~si~~~-----s~~~i~S~~ 126 (365)
T 1h7s_A 110 ALSSLCAL-----SDVTISTCH 126 (365)
T ss_dssp HHHHHHHH-----SEEEEEEEC
T ss_pred HHHHHHHH-----CCEEEEEEC
T ss_conf 88888862-----451588843