HHsearch results for GI: 254780701 and protein with PDBid: 1mu5_A
>1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A*
Probab=99.63 E-value=4.7e-15 Score=146.11 Aligned_cols=109 Identities=20% Similarity=0.321 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCC---EEEEEEEEECC--CEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 989999887776556886067988---79999999769--8599999878997898785442265231577767899988
Q gi|254780701|r 364 DEKGMRQVILNLLSNAVKFTAIGG---RVHVTVGWTSG--RGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGV 438 (495)
Q Consensus 364 D~~~L~qvl~NLi~NAiK~T~~gG---~V~v~~~~~~~--~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~Gt 438 (495)
+...|.|++.|||+||++|++.+| .|.|.+...++ +...|.|+|||+|||+++++++|++|++++...++...|.
T Consensus 29 ~~~~l~~~v~ElV~NAiDa~~~~g~~p~I~I~I~~~~~~~~~~~I~V~DNG~GI~~e~i~~iF~r~~~~sk~~~~~~~G~ 108 (471)
T 1mu5_A 29 PARALYQTVRELIENSLDATDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSSKYVNRQTRGM 108 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHTTGGGTCCCEEEEEEEEEETTTTEEEEEEECCSCCCCGGGHHHHHHCCCCC-CCCCSCCSCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 02169999999999999978855998716999997368886899999962899999999998650262567665036896
Q ss_pred -CCHHHHHHHHHHHCCCE-EEEEEECCCCEEE-EEEE
Q ss_conf -80589999999961985-9999798995298-8984
Q gi|254780701|r 439 -GLGLPIAQSIMANHGGQ-FLIRSKLREGVEV-IAIL 472 (495)
Q Consensus 439 -GLGLaIvk~lve~hgG~-i~v~S~~G~Gt~f-~v~L 472 (495)
||||+++..++++|+|+ +.|.|+.+.|++. .+.+
T Consensus 109 ~GlGl~~~~~~s~~~~G~~i~V~S~~~~~~~~~~~~l 145 (471)
T 1mu5_A 109 YGLGVKAAVLYSQMHQDKPIEIETSPVNSKRIYTFKL 145 (471)
T ss_dssp CTTTHHHHHHHHHHHCCCCEEEEEECTTCSEEEEEEE
T ss_pred CCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEE
T ss_conf 2134899999999737946999994489973799873