HHsearch results for GI: 254780701 and protein with PDBid: 1y8o_A
>1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: LPA ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A*
Probab=99.97 E-value=1.2e-29 Score=271.15 Aligned_cols=229 Identities=16% Similarity=0.168 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999988999997764201389999----9999985033687893789999999999999999999999999874220015
Q gi|254780701|r 245 ENLAKSRFLASMSHELRTPLNAIL----GFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYE 320 (495)
Q Consensus 245 a~~~Ks~FlA~~SHELRTPL~aI~----g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~ 320 (495)
.+..+++|...++|+++++.+.|. |..|+...........+..+.+++.+..+-..+..++++.+.+++.+.....
T Consensus 114 ~~~~~~~F~~~l~~il~~h~~~i~~la~G~~El~~~~~~~~~~~~~l~~~Ld~~~~sri~~r~Li~~~l~l~~~~~~~~~ 193 (419)
T 1y8o_A 114 DPQVLDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVH 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCSS
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 58999999999999996740499999999999876521353208999999999997356589988666543203247545
Q ss_pred CC-----CCCCCHHHHHHHHHHHHHHHHHHCCC-----CCE---ECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 65-----31011999999999999999973112-----210---003676101047989999887776556886067988
Q gi|254780701|r 321 LS-----ESAISLIDIVRECIIMLQLRAQEKNI-----EIF---QKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGG 387 (495)
Q Consensus 321 l~-----~~~v~L~~li~~~~~~~~~~A~~~~~-----~l~---~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG 387 (495)
.+ ...+++.++++++.+.....+..+-. .+. ...++....+.+||..|+|||.||+.||+|||++++
T Consensus 194 ~~~vg~I~~~~~~~~iv~~a~~~a~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~dp~~L~qIL~NLL~NAikat~e~~ 273 (419)
T 1y8o_A 194 PKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELY 273 (419)
T ss_dssp TTSBTTBEEEEEHHHHHHHHHHHHHHHHHHHHSCCCCEEEEEEETTSTTSCCEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 45234325558899999999999999999861668640245421147998758996799999999999998999888652
Q ss_pred --------EEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCC------CCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf --------7999999976985999998789978987854422652315------77767899988805899999999619
Q gi|254780701|r 388 --------RVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQG------SIAIKSAEQGVGLGLPIAQSIMANHG 453 (495)
Q Consensus 388 --------~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~------~~~~~~~~~GtGLGLaIvk~lve~hg 453 (495)
.|.|.+.. .++.+.|.|+|+|+|||++++++||++||+. +.+.++..+|+||||+|||.+++.||
T Consensus 274 ~~~~~~~P~I~V~i~~-~~~~v~I~IsD~G~GI~~e~~~~IF~~fytt~~~~~~~~~~~~~~~G~GlGL~isk~~ae~~g 352 (419)
T 1y8o_A 274 EDRKEGYPAVKTLVTL-GKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQ 352 (419)
T ss_dssp TTCSSCCCCEEEEEEE-CSSEEEEEEEECSCCCCHHHHGGGGCTTTC-------------CC--CTTHHHHHHHHHHHTT
T ss_pred CCCCCCCCEEEEEEEE-CCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 3467888707999985-696899999879999898999877075762688776555566898964141999999999869
Q ss_pred CEEEEEEECCCCEEEEEEECH
Q ss_conf 859999798995298898472
Q gi|254780701|r 454 GQFLIRSKLREGVEVIAILPN 474 (495)
Q Consensus 454 G~i~v~S~~G~Gt~f~v~LP~ 474 (495)
|+|+++|.+|.||.|+++||+
T Consensus 353 G~i~v~S~~G~GT~~~l~L~~ 373 (419)
T 1y8o_A 353 GDLKLYSMEGVGTDAVIYLKA 373 (419)
T ss_dssp CEEEEEEETTTEEEEEEEEES
T ss_pred CEEEEEEECCCCEEEEEEEEC
T ss_conf 989999647963699999728