HHsearch results for GI: 254780701 and protein with PDBid: 1y8o_A

>1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: LPA ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A*
Probab=99.97  E-value=1.2e-29  Score=271.15  Aligned_cols=229  Identities=16%  Similarity=0.168  Sum_probs=172.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             999988999997764201389999----9999985033687893789999999999999999999999999874220015
Q gi|254780701|r  245 ENLAKSRFLASMSHELRTPLNAIL----GFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYE  320 (495)
Q Consensus       245 a~~~Ks~FlA~~SHELRTPL~aI~----g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~  320 (495)
                      .+..+++|...++|+++++.+.|.    |..|+...........+..+.+++.+..+-..+..++++.+.+++.+.....
T Consensus       114 ~~~~~~~F~~~l~~il~~h~~~i~~la~G~~El~~~~~~~~~~~~~l~~~Ld~~~~sri~~r~Li~~~l~l~~~~~~~~~  193 (419)
T 1y8o_A          114 DPQVLDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVH  193 (419)
T ss_dssp             CHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCSS
T ss_pred             HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             58999999999999996740499999999999876521353208999999999997356589988666543203247545


Q ss_pred             CC-----CCCCCHHHHHHHHHHHHHHHHHHCCC-----CCE---ECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             65-----31011999999999999999973112-----210---003676101047989999887776556886067988
Q gi|254780701|r  321 LS-----ESAISLIDIVRECIIMLQLRAQEKNI-----EIF---QKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGG  387 (495)
Q Consensus       321 l~-----~~~v~L~~li~~~~~~~~~~A~~~~~-----~l~---~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG  387 (495)
                      .+     ...+++.++++++.+.....+..+-.     .+.   ...++....+.+||..|+|||.||+.||+|||++++
T Consensus       194 ~~~vg~I~~~~~~~~iv~~a~~~a~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~dp~~L~qIL~NLL~NAikat~e~~  273 (419)
T 1y8o_A          194 PKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELY  273 (419)
T ss_dssp             TTSBTTBEEEEEHHHHHHHHHHHHHHHHHHHHSCCCCEEEEEEETTSTTSCCEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             45234325558899999999999999999861668640245421147998758996799999999999998999888652


Q ss_pred             --------EEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCC------CCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             --------7999999976985999998789978987854422652315------77767899988805899999999619
Q gi|254780701|r  388 --------RVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQG------SIAIKSAEQGVGLGLPIAQSIMANHG  453 (495)
Q Consensus       388 --------~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~------~~~~~~~~~GtGLGLaIvk~lve~hg  453 (495)
                              .|.|.+.. .++.+.|.|+|+|+|||++++++||++||+.      +.+.++..+|+||||+|||.+++.||
T Consensus       274 ~~~~~~~P~I~V~i~~-~~~~v~I~IsD~G~GI~~e~~~~IF~~fytt~~~~~~~~~~~~~~~G~GlGL~isk~~ae~~g  352 (419)
T 1y8o_A          274 EDRKEGYPAVKTLVTL-GKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQ  352 (419)
T ss_dssp             TTCSSCCCCEEEEEEE-CSSEEEEEEEECSCCCCHHHHGGGGCTTTC-------------CC--CTTHHHHHHHHHHHTT
T ss_pred             CCCCCCCCEEEEEEEE-CCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf             3467888707999985-696899999879999898999877075762688776555566898964141999999999869


Q ss_pred             CEEEEEEECCCCEEEEEEECH
Q ss_conf             859999798995298898472
Q gi|254780701|r  454 GQFLIRSKLREGVEVIAILPN  474 (495)
Q Consensus       454 G~i~v~S~~G~Gt~f~v~LP~  474 (495)
                      |+|+++|.+|.||.|+++||+
T Consensus       353 G~i~v~S~~G~GT~~~l~L~~  373 (419)
T 1y8o_A          353 GDLKLYSMEGVGTDAVIYLKA  373 (419)
T ss_dssp             CEEEEEEETTTEEEEEEEEES
T ss_pred             CEEEEEEECCCCEEEEEEEEC
T ss_conf             989999647963699999728