HHsearch results for GI: 254780701 and protein with PDBid: 2c2a_A
>2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A*
Probab=100.00 E-value=0 Score=449.17 Aligned_cols=236 Identities=31% Similarity=0.508 Sum_probs=215.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999889999977642013899999999985033687893789999999999999999999999999874220015
Q gi|254780701|r 241 RAEEENLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYE 320 (495)
Q Consensus 241 ~ae~a~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~ 320 (495)
+.++.+++|++|++++||||||||++|.||+++|.+.. ...+++++++|++.|.+++++|..||+++||+||+|+|.++
T Consensus 12 rl~~~~~~k~~f~a~isHELrtPL~~I~~~~~~l~~~~-~~~~~~~~~~~l~~i~~~~~rl~~li~~lL~~sr~e~~~~~ 90 (258)
T 2c2a_A 12 RLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSL-GELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQ 90 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTG-GGCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999979998589999999999997145-56999999999999999999999999999999844279987
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCH-HCCCCHHHHHHHHHHHHHHHHHCCCCCC---EEEEEEEEE
Q ss_conf 653101199999999999999997311221000367610-1047989999887776556886067988---799999997
Q gi|254780701|r 321 LSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDPSLS-SVWADEKGMRQVILNLLSNAVKFTAIGG---RVHVTVGWT 396 (495)
Q Consensus 321 l~~~~v~L~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~-~v~~D~~~L~qvl~NLi~NAiK~T~~gG---~V~v~~~~~ 396 (495)
++.+++|+.+++++++..+.+.+..+++.+.++.+++.| .+++|+.+|+||+.||++||+|||++|| .|.+.+..
T Consensus 91 l~~~~~~l~~l~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~D~~~l~qvl~NLl~NAik~t~~g~~~~~i~v~~~~- 169 (258)
T 2c2a_A 91 INREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDE- 169 (258)
T ss_dssp CCCEEEEHHHHHHHHHHHHHHHHHHTTCEEEEEESSCSCCEEEECHHHHHHHHHHHHHHHHHTCCTTCTTCEEEEEEEE-
T ss_pred CEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE-
T ss_conf 4215876999999999999999997697899970899866999879999999999999999855358982489999960-
Q ss_pred CCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECHHH
Q ss_conf 69859999987899789878544226523157776789998880589999999961985999979899529889847247
Q gi|254780701|r 397 SGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAILPNTR 476 (495)
Q Consensus 397 ~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~f~v~LP~~~ 476 (495)
.++.+.|+|+|+|+|||++++++||+||||++++.++..+|+||||+|||+|+++|||+|+++|++|+||+|+++||..+
T Consensus 170 ~~~~~~i~V~D~G~GI~~e~~~~iF~~F~r~~~~~~~~~~G~GLGL~i~k~iv~~hgG~I~v~S~~g~Gt~f~i~lP~~~ 249 (258)
T 2c2a_A 170 KDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR 249 (258)
T ss_dssp ETTEEEEEEEECSSCCCGGGTTGGGSTTCCCC---------CCCTHHHHHHHHHHTTCEEEEEEETTTEEEEEEEEECCC
T ss_pred CCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCC
T ss_conf 59989999998289889899998745988288888899994048999999999983998999955999269999961897
Q ss_pred CC
Q ss_conf 07
Q gi|254780701|r 477 VL 478 (495)
Q Consensus 477 ~~ 478 (495)
..
T Consensus 250 ~~ 251 (258)
T 2c2a_A 250 AG 251 (258)
T ss_dssp --
T ss_pred CC
T ss_conf 57