HHsearch results for GI: 254780701 and protein with PDBid: 3h4l_A
>3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.00038 Score=52.64 Aligned_cols=87 Identities=16% Similarity=0.174 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCC-----CC-CCCCCCCC
Q ss_conf 9998877765568860679887999999976985999998789978987854422652315777-----67-89998880
Q gi|254780701|r 367 GMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIA-----IK-SAEQGVGL 440 (495)
Q Consensus 367 ~L~qvl~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~-----~~-~~~~GtGL 440 (495)
++.+|+.-||.|||..- . ..|.|.+. ++|.-.|+|.|+|.||++++++.+++++.----. .+ ...|--|-
T Consensus 25 ~p~svvkELveNsiDA~-A-t~I~v~i~--~~g~~~i~V~DnG~Gi~~~d~~~~~~r~~TSK~~~~~dl~~~~t~GfRGe 100 (367)
T 3h4l_A 25 DLTTAVKELVDNSIDAN-A-NQIEIIFK--DYGLESIECSDNGDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGE 100 (367)
T ss_dssp SHHHHHHHHHHHHHHTT-C-SEEEEEEE--TTTTSEEEEEECSCCCCGGGTTTTTCCEEC---------CCCCEEEETTH
T ss_pred CHHHHHHHHHHHHHCCC-C-CEEEEEEE--CCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 88999999997776489-5-98999998--79846999998999889789987654205875553223311246664407
Q ss_pred HHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 5899999999619859999798
Q gi|254780701|r 441 GLPIAQSIMANHGGQFLIRSKL 462 (495)
Q Consensus 441 GLaIvk~lve~hgG~i~v~S~~ 462 (495)
+|+-...+ +++++.|..
T Consensus 101 AL~sI~~v-----s~l~I~S~~ 117 (367)
T 3h4l_A 101 ALSSLCGI-----AKLSVITTT 117 (367)
T ss_dssp HHHHHHHS-----SEEEEEEES
T ss_pred HHHHHHHH-----CCEEEEEEE
T ss_conf 89988752-----564799850