HHsearch results for GI: 254780701 and protein with PDBid: 3jz3_A

>3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli}
Probab=100.00  E-value=6.9e-43  Score=384.73  Aligned_cols=213  Identities=25%  Similarity=0.373  Sum_probs=193.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             99999776420138999999999850336878937899999999999999999999999998742200156531011999
Q gi|254780701|r  251 RFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYELSESAISLID  330 (495)
Q Consensus       251 ~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~l~~~~v~L~~  330 (495)
                      +|++++||||||||++|.|++|++.....   +++..++++..|.+++++|..+|+++|++||+|.+...++.+++++.+
T Consensus         4 ~F~a~iSHELrTPLt~I~~~~ell~~~~~---~~~~~~~~l~~i~~~~~rl~~li~~lL~~sr~~~~~~~~~~~~~~l~~   80 (222)
T 3jz3_A            4 RFTSDAAHELRSPLTALKVQTEVAQLSDD---DPQARKKALLQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLED   80 (222)
T ss_dssp             ---------------------------------------CEECCC-CHHHHHHHHHHHHHHHTCCCSTTSTTCEEEEHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHH
T ss_conf             99999999982899999999999854799---989999999999999999999999999998763055646544442899


Q ss_pred             HHHHHHHHHHHHHHHCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEECCC
Q ss_conf             99999999999997311221000367610104798999988777655688606798879999999769859999987899
Q gi|254780701|r  331 IVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIKDNGP  410 (495)
Q Consensus       331 li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~DtG~  410 (495)
                      ++++++..+.+.+..+++.+.+..+++.+.+.+|+.+|+||+.|||+||+||||+||.|.|++.  .+ .  +.|+|+|+
T Consensus        81 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~l~~vl~NLl~NAikys~~~~~I~i~~~--~~-~--~~v~D~G~  155 (222)
T 3jz3_A           81 LLQSSVMDIYHTAQQAKIDVRLTLNAHSIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLN--AD-N--FIVRDNGP  155 (222)
T ss_dssp             HHHHHHHHHHHHHHHTTCEEEEEESSCSCEEEECHHHHHHHHHHHHHHHHHTCCTTCEEEEEEC--SS-E--EEEECSCC
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE--EE-E--EEECCCCC
T ss_conf             9999999999999974957999707766468326999999999999999986899967999997--42-4--99835899


Q ss_pred             CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECH
Q ss_conf             7898785442265231577767899988805899999999619859999798995298898472
Q gi|254780701|r  411 GIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAILPN  474 (495)
Q Consensus       411 GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~f~v~LP~  474 (495)
                      |||++++++||+||||.++   +..+|+||||+|||+|+++|||+|+++|.+|+||+|+++|+-
T Consensus       156 GI~~e~~~~iFe~F~r~~~---~~~~G~GLGL~Ivk~iv~~hgG~I~v~s~~~~Gt~f~i~F~E  216 (222)
T 3jz3_A          156 GVTPEALARIGERFYRPPG---QTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSWLE  216 (222)
T ss_dssp             -----------------------------CTHHHHHHHHHHTTCEEECCBCTTSSBEEEEECCC
T ss_pred             CCCHHHHHHHCCCCCCCCC---CCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEC
T ss_conf             9899999986179741899---999952678999999999839989999779898799999773