HHsearch results for GI: 254780701 and protein with PDBid: 3n0r_A
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides}
Probab=97.96 E-value=5.8e-08 Score=85.30 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=73.8
Q ss_pred HHHHHHCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHH
Q ss_conf 99997311221000367610104798999988777655688606798879999999769859999987899789878544
Q gi|254780701|r 340 QLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPT 419 (495)
Q Consensus 340 ~~~A~~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~ 419 (495)
...|+.|++++.++++|++| +|||++.||++||.|.... ..+.+..- ..+ +++.+........
T Consensus 13 g~~~r~k~L~L~~~iaP~LP-------rLRQil~nLvGNA~~Gd~~-v~~~Le~l-~~~--------~~~~~~~~~~r~~ 75 (286)
T 3n0r_A 13 GLVPRGSEMHLLARLAPHLP-------YIRRYARALTGDQATGDHY-VRVALEAL-AAG--------ELVLDANLSPRVA 75 (286)
T ss_dssp -------CCCHHHHHGGGHH-------HHHHHHHHHHSCHHHHHHH-HHHHHHHH-HTT--------SSCCCSSSCHHHH
T ss_pred CCCCCCCCCEEHHHHCCCCC-------HHHHHHHHHHCCCCHHHHH-HHHHHHHH-HCC--------CCCCCCCCCCHHH
T ss_conf 86768889763444156885-------8999999984682304799-99999999-549--------5326888883078
Q ss_pred HCCCCCCCCCC-----CCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEC
Q ss_conf 22652315777-----6789998880589999999961985999979899529889847
Q gi|254780701|r 420 VLTSFGQGSIA-----IKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAILP 473 (495)
Q Consensus 420 iF~~F~r~~~~-----~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~f~v~LP 473 (495)
+|++|.|...+ .....+|+|+|+.|++++.+.+++. +.+.+..+...++
T Consensus 76 Lf~~f~~i~~s~~~~~~~~~~~g~gl~~~i~~~l~~l~~~~-----r~~~~~~~~~~~~ 129 (286)
T 3n0r_A 76 LYRVFHAIWLSSGAQLEVGHDQGLHAGDDAAQRLMRIAPRS-----RQAFLLTALEGFT 129 (286)
T ss_dssp HHHHHHHHHSCTTC----CCCCCCCTTSHHHHHHHHHSCHH-----HHHHHHHHTTCCC
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC-----CCCCCCCCEECCC
T ss_conf 89988754101465455677652047899999861035445-----4210123221257