RPSBLAST alignment of GI: 254780703 and protein with PDBid: 2pff

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 42.5 bits (99), Expect = 8e-05
 Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 30/132 (22%)

Query: 26  VSRKMVDSS-VRAFIEGDTVLAHKVIDN---DVVLDQLERDIGDKAIITIAKRQPMASDL 81
           + +++V++S VR  +  +T L HKV++    D    Q+E          I  R  +  D 
Sbjct: 744 LRKELVETSEVRKAVSIETALEHKVVNGNSADAAYAQVE----------IQPRANIQLDF 793

Query: 82  REI--VGSIK-IA-ADLERIGDLAKNTAKRVLALQMF------GVPRKLVWTIEPLAELS 131
            E+     +K IA A+LE + DL     +RV+ +  F      G  R   W +E   E S
Sbjct: 794 PELKPYKQVKQIAPAELEGLLDL-----ERVIVVTGFAEVGPWGSARTR-WEMEAFGEFS 847

Query: 132 LEQLSEILDVYG 143
           LE   E+  + G
Sbjct: 848 LEGCVEMAWIMG 859