RPSBLAST alignment for GI: 254780704 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272

 Score = 79.3 bits (195), Expect = 8e-16
 Identities = 55/204 (26%), Positives = 110/204 (53%), Gaps = 15/204 (7%)

Query: 25   INLKIPQNSVTALIGPSGCGKSTFLRCLNRMNETIDNCVFTGEIILDGKNIYQSSVDVVR 84
            +N+   +N +TA +G +G GK+T L  L  +         +G +++ GK+I ++++D VR
Sbjct: 949  LNITFYENQITAFLGHNGAGKTTTLSILTGLLPPT-----SGTVLVGGKDI-ETNLDAVR 1002

Query: 85   LRARVGMVFQRPNPFPK-SIYDNVAYGPRIHGLGNNKADIDQIVEMSLKKASLFNEVKDR 143
                +GM  Q    F   ++ +++ +  ++ G    +A ++  +E  L+   L ++  + 
Sbjct: 1003 --QSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLE--MEAMLEDTGLHHKRNE- 1057

Query: 144  LFHDASLLSGGQQQRVCIARALAVNPEVILMDEPCSALDPIATASVEELIHELRESLTIV 203
               +A  LSGG Q+++ +A A   + +V+++DEP S +DP +  S+ +L+ + R   TI+
Sbjct: 1058 ---EAQDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTII 1114

Query: 204  IVTHSMQQAARVSQRAAMFHMGHL 227
            + TH M +A  +  R A+   G L
Sbjct: 1115 MSTHHMDEADLLGDRIAIISQGRL 1138