RPSBLAST alignment for GI: 254780704 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272
 Score = 55.0 bits (132), Expect = 2e-08
 Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 48/208 (23%)

Query: 36   ALIGPSGCGKSTFLRCLNRMNETIDNCVFTGEIILDGKNIYQSSVDVVRLRARVGMVFQR 95
             L+G +G GK+T  + L     T D  V +G+  + GK+I  +  DV             
Sbjct: 1969 GLLGVNGAGKTTTFKML-----TGDTTVTSGDATVAGKSILTNISDV------------- 2010

Query: 96   PNPFPKSIYDNVAYGPRIHGL-----------------GNNKADIDQIVEMSLKKASLFN 138
                    + N+ Y P+   +                 G    +I+++   S++   L +
Sbjct: 2011 --------HQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGL-S 2061

Query: 139  EVKDRLFHDASLLSGGQQQRVCIARALAVNPEVILMDEPCSALDPIATASVEELIHE-LR 197
               DRL   A   SGG ++++  A AL   P ++L+DEP + +DP A   +   I   +R
Sbjct: 2062 LYADRL---AGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIR 2118

Query: 198  ESLTIVIVTHSMQQAARVSQRAAMFHMG 225
            E   +V+ +HSM++   +  R A+   G
Sbjct: 2119 EGRAVVLTSHSMEECEALCTRLAIMVKG 2146