RPSBLAST alignment for GI: 254780704 and conserved domain: TIGR01842

>gnl|CDD|162555 TIGR01842, type_I_sec_PrtD, type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 544

 Score = 82.0 bits (203), Expect = 1e-16
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 25/200 (12%)

Query: 17  GEKRALFDINLKIPQNSVTALIGPSGCGKSTFLRCLNRMNETIDNCVFTGEIILDGKNIY 76
           G+K  L  I+ ++      A+IGPSG GKST    L R+   I     +G + LDG ++ 
Sbjct: 329 GKKPTLRGISFRLQAGEALAIIGPSGSGKST----LARLIVGIWPPT-SGSVRLDGADLK 383

Query: 77  QSSVDVVRLRARVGMVFQRPNPFPKSIYDNVAYGPRIHGLGNNKADIDQIVEMSLKKASL 136
           Q   D       +G + Q    FP ++ +N+A        G N AD ++I+E +  K + 
Sbjct: 384 Q--WDRETFGKHIGYLPQDVELFPGTVAENIAR------FGEN-ADPEKIIEAA--KLAG 432

Query: 137 FNEVKDRL--FHDASL------LSGGQQQRVCIARALAVNPEVILMDEPCSALDPIATAS 188
            +E+  RL   +D  +      LSGGQ+QR+ +ARAL  +P+++++DEP S LD     +
Sbjct: 433 VHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQA 492

Query: 189 VEELIHELR-ESLTIVIVTH 207
           +   I  L+   +T+V++TH
Sbjct: 493 LANAIKALKARGITVVVITH 512