RPSBLAST alignment for GI: 254780704 and conserved domain: PRK15439
>gnl|CDD|185336 PRK15439, PRK15439, autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional. Length = 510
Score = 48.5 bits (116), Expect = 1e-06
Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 29/238 (12%)
Query: 12 VSVCYGEKRALFDINLKIPQNSVTALIGPSGCGKSTFLRCLNRMNETIDNCVFTGEIILD 71
+S Y L I+ + V AL+G +G GKST ++ + + D +G + +
Sbjct: 17 ISKQYSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGI-VPPD----SGTLEIG 71
Query: 72 GKNIYQSSVDVVRLRARVG--MVFQRPNPFPK-SIYDNVAYG-PRIHGLGNNKADIDQIV 127
G + + ++G +V Q P FP S+ +N+ +G P+ + +
Sbjct: 72 GNPCARLTPA---KAHQLGIYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAAL 128
Query: 128 EMSLKKASLFNEVKDRLFHDASLLSGGQQQRVCIARALAVNPEVILMDEPCSALDPIATA 187
L S A L +Q V I R L + ++++DEP ++L P T
Sbjct: 129 GCQLDLDSS-----------AGSLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETE 177
Query: 188 SVEELIHELR-ESLTIVIVTHSMQQAARVSQRAAMFHMGHLV-----EEDDTDKMFTA 239
+ I EL + + IV ++H + + +++ R ++ G + + TD + A
Sbjct: 178 RLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDDIIQA 235