RPSBLAST alignment for GI: 254780704 and conserved domain: cd03233
>gnl|CDD|72992 cd03233, ABC_PDR_domain1, The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 202
Score = 42.9 bits (101), Expect = 8e-05
Identities = 37/182 (20%), Positives = 63/182 (34%), Gaps = 46/182 (25%)
Query: 22 LFDINLKIPQNSVTALIGPSGCGKSTFLRCLNRMNETIDNCVFTGEIILDGKNIYQSSVD 81
L D + + + ++G G G ST L+ L N T N G+I +G
Sbjct: 23 LKDFSGVVKPGEMVLVLGRPGSGCSTLLKALA--NRTEGNVSVEGDIHYNGIP------- 73
Query: 82 VVRLRARVGMVFQRPNPFPKSIYDNVAYGPRIHGLGNNKADIDQ---IVEMSLKKASLFN 138
Y A + ++ D+ V +L A
Sbjct: 74 ----------------------YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFAL--- 108
Query: 139 EVKDRLFHDASL--LSGGQQQRVCIARALAVNPEVILMDEPCSALDPIATASVEELIHEL 196
R + + +SGG+++RV IA AL V+ D LD +++ E++ +
Sbjct: 109 ----RCKGNEFVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLD---SSTALEILKCI 161
Query: 197 RE 198
R
Sbjct: 162 RT 163