RPSBLAST alignment for GI: 254780704 and conserved domain: cd03251

>gnl|CDD|73010 cd03251, ABCC_MsbA, MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 234
 Score =  109 bits (273), Expect = 1e-24
 Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 26/206 (12%)

Query: 12  VSVCYGEKR--ALFDINLKIPQNSVTALIGPSGCGKSTFLRCLNRMNETIDNCVFTGEII 69
           V+  Y       L DI+L IP     AL+GPSG GKST +  + R  +     V +G I+
Sbjct: 6   VTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD-----VDSGRIL 60

Query: 70  LDGKNIYQSSVDVVRLRARVGMVFQRPNPFPKSIYDNVAYGPRIHGLGNNKADIDQIVEM 129
           +DG ++      +  LR ++G+V Q    F  ++ +N+AYG          A  +++ E 
Sbjct: 61  IDGHDV--RDYTLASLRRQIGLVSQDVFLFNDTVAENIAYGRP-------GATREEVEEA 111

Query: 130 SLKKASLFNEVKDRL---FH-----DASLLSGGQQQRVCIARALAVNPEVILMDEPCSAL 181
           +  +A+  +E    L   +          LSGGQ+QR+ IARAL  +P ++++DE  SAL
Sbjct: 112 A--RAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPILILDEATSAL 169

Query: 182 DPIATASVEELIHELRESLTIVIVTH 207
           D  +   V+  +  L ++ T  ++ H
Sbjct: 170 DTESERLVQAALERLMKNRTTFVIAH 195