RPSBLAST alignment for GI: 254780704 and conserved domain: cd03254
>gnl|CDD|73013 cd03254, ABCC_Glucan_exporter_like, Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 229
Score = 120 bits (303), Expect = 3e-28
Identities = 60/234 (25%), Positives = 112/234 (47%), Gaps = 24/234 (10%)
Query: 12 VSVCYGEKR-ALFDINLKIPQNSVTALIGPSGCGKSTFLRCLNRMNETIDNCVFTGEIIL 70
V+ Y EK+ L DIN I A++GP+G GK+T + L R + G+I++
Sbjct: 8 VNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD-----PQKGQILI 62
Query: 71 DGKNIYQSSVDVVRLRARVGMVFQRPNPFPKSIYDNVAYGPRIHGLGNNKADIDQIVEMS 130
DG +I + LR+ +G+V Q F +I +N+ G A D+ V +
Sbjct: 63 DGIDI--RDISRKSLRSMIGVVLQDTFLFSGTIMENIRLG-------RPNAT-DEEVIEA 112
Query: 131 LKKASLFNEVKDR-------LFHDASLLSGGQQQRVCIARALAVNPEVILMDEPCSALDP 183
K+A + + L + LS G++Q + IARA+ +P+++++DE S +D
Sbjct: 113 AKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKILILDEATSNIDT 172
Query: 184 IATASVEELIHELRESLTIVIVTHSMQQAARVSQRAAMFHMGHLVEEDDTDKMF 237
++E + +L + T +I+ H + + + + + G ++EE D++
Sbjct: 173 ETEKLIQEALEKLMKGRTSIIIAHRL-STIKNADKILVLDDGKIIEEGTHDELL 225