HHsearch alignment for GI: 254780705 and conserved domain: COG0600
>COG0600 TauC ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].
Probab=99.68 E-value=1.2e-13 Score=105.81 Aligned_cols=196 Identities=21% Similarity=0.326 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 20266789999999999999999999999999864373024567898998876533699999999999986266630046
Q gi|254780705|r 201 AGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLINFFKMPRSTAL 280 (425)
Q Consensus 201 ~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~~~~~~~~~~l 280 (425)
T Consensus 57 g~L~~~~~~Sl~rv~~Gf~la~~~gi~lgil~g~~---~~~~~~l~P~i~~l~~iP~lA~~----Pl~ilwfG~g~~s-- 127 (258)
T COG0600 57 GELFQHLLASLLRVLLGFALAAVLGIPLGILMGLS---RLLERLLDPLVQVLRPIPPLALA----PLAILWFGIGETS-- 127 (258)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHCCCHHHHH----HHHHHHHHCCCCH--
T ss_conf 55999999999999999999999999999999857---99999996999999317779999----9999999079611--
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89753345-43668999999998511067898998707721277778839753325899999999998767799999854
Q gi|254780705|r 281 VGGLILAL-MTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARALGETAPLLFVGM 359 (425)
Q Consensus 281 ~g~~~l~~-m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~ra~GEta~ll~~~~ 359 (425)
T Consensus 128 --~i~i~~~~~ffpi~int~~Gvr~v~~~~~~~ar~lgas~~~~l~~v~lP~AlP~i~tgLRia~g~aw~~~VvaE~l~a 205 (258)
T COG0600 128 --KIVIAVLGAFFPILINTLDGVRSVDPDLLELARTLGASRWQILRKVILPAALPYIFTGLRIAIGLAWIGLVVAELLGA 205 (258)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf --999999999999999999998718999999999809897778776205300789999999999999999999999705
Q ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 321013665613445579999998603665006999999999999999999999999999741049
Q gi|254780705|r 360 VAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNRFKKRW 425 (425)
Q Consensus 360 ~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r~~~~w 425 (425)
T Consensus 206 ~--------------~GLG~~i~~---a~~~~~~~~v~a~i~~i~~lgll~d~~v~~~er~~~~-w 253 (258)
T COG0600 206 S--------------SGLGYLILD---ARNNLQTDLVFAAILVIALLGLLLDRLVRLLERRLLR-W 253 (258)
T ss_pred C--------------CCHHHHHHH---HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C
T ss_conf 6--------------668799999---9985167899999999999999999999999999852-1