HHsearch alignment for GI: 254780705 and conserved domain: COG0765
>COG0765 HisM ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].
Probab=99.72 E-value=4.2e-14 Score=108.63 Aligned_cols=209 Identities=19% Similarity=0.150 Sum_probs=164.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 01202667899999999999999999999999998643730245678989988765336999999999999862666300
Q gi|254780705|r 199 EVAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLINFFKMPRST 278 (425)
Q Consensus 199 e~~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~~~~~~~~~ 278 (425)
T Consensus 14 ~~~~ll~G~~~Tl~ls~~~~~~g~vlG~~la~~r~--s~~~~l~~~~~~Yv~~~RgtPlLvqlf~~yfg~lp~~gi~~~~ 91 (222)
T COG0765 14 YLPFLLKGLLVTLLLTLLSIVLGLVLGLLLALMRL--SGNKPLRWLARAYVEIFRGTPLLVQLFFIYFGLLPLLGIELDP 91 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 58999999999999999999999999999999997--7847899999998877617419999999999857984467779
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 46897533454366899999999851106789899870772127777883975332589999999999876779999985
Q gi|254780705|r 279 ALVGGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARALGETAPLLFVG 358 (425)
Q Consensus 279 ~l~g~~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~ra~GEta~ll~~~ 358 (425)
T Consensus 92 ~~aavial~l~~~AY~aEi~R~GI~sV~kGQ~EAA~aLGls~~q~~r~IIlPQAlr~~lP~l~n~~i~liK~TSl~svIg 171 (222)
T COG0765 92 FTAAVIALSLNSGAYLAEIVRAGIQSVPKGQWEAARALGLTYWQTMRYVILPQALRVILPPLGNQFISLIKDTSLVSVIG 171 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999961888689999985999866866300235699865176899999999829999998
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 4321013665613445579999998603665006999999999999999999999999999741049
Q gi|254780705|r 359 MVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNRFKKRW 425 (425)
Q Consensus 359 ~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r~~~~w 425 (425)
T Consensus 172 v~E--------L~----~~a~~i~~---~t~-~~~e~~~~~a~iY~~l~~~ls~~~~~lErr~~~~~ 222 (222)
T COG0765 172 VVE--------LT----RAAQIIAA---RTF-RPFEVYLLAALIYLILCLPLSLLSRRLERRLARYG 222 (222)
T ss_pred HHH--------HH----HHHHHHHH---HHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 999--------99----99999998---665-17999999999999999999999999998852379