HHsearch alignment for GI: 254780705 and conserved domain: COG1174
>COG1174 OpuBB ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism].
Probab=99.76 E-value=1.2e-15 Score=118.56 Aligned_cols=153 Identities=24% Similarity=0.372 Sum_probs=133.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 01202667899999999999999999999999998643730245678989988765336999999999999862666300
Q gi|254780705|r 199 EVAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLINFFKMPRST 278 (425)
Q Consensus 199 e~~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~~~~~~~~~ 278 (425)
T Consensus 20 ~~~~~~~~~~~Hl~l~~~a~~~a~~igVplGIl~~r~---~~~~~~v~~v~nv~qTiPsl--All--allipv~GiG~-- 90 (221)
T COG1174 20 RQDYLLALTLQHLLLVLLAVLIAILIGVPLGILVTRS---RRLAGLVLGVANVLQTIPSL--ALL--ALLIPVLGIGL-- 90 (221)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHCHHH--HHH--HHHHHHHCCCC--
T ss_conf 1879999999999999999999999997889998734---88888999999998616089--999--99999856886--
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 46897533454366899999999851106789899870772127777883975332589999999999876779999985
Q gi|254780705|r 279 ALVGGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARALGETAPLLFVG 358 (425)
Q Consensus 279 ~l~g~~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~ra~GEta~ll~~~ 358 (425)
T Consensus 91 -~PAiiAL~lYsLLPIvrNT~~GL~~V~~~v~EAa~gmGMT~~Q~L~~VelPlAlPvIlaGIR~a~V~~ig~Atiaa~IG 169 (221)
T COG1174 91 -TPAIIALFLYSLLPIVRNTYTGLASVPPSVIEAARGMGMTRWQRLLKVELPLALPVILAGIRTAVVINIGTATIAALIG 169 (221)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf -3899999999971999999999814987789998865998787989741200189998648999999999999999982
Q ss_pred HHH
Q ss_conf 432
Q gi|254780705|r 359 MVA 361 (425)
Q Consensus 359 ~~~ 361 (425)
T Consensus 170 AGG 172 (221)
T COG1174 170 AGG 172 (221)
T ss_pred CCC
T ss_conf 774