HHsearch alignment for GI: 254780705 and conserved domain: COG4597
>COG4597 BatB ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].
Probab=97.90 E-value=5.1e-06 Score=57.15 Aligned_cols=124 Identities=16% Similarity=0.203 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH---HCCCCC---HH--H
Q ss_conf 9999999999999999986437302-----4567898998876533699999999999--986---266630---04--6
Q gi|254780705|r 216 IVIGLSFPLGIASAIYLEEFSHKGF-----FSSFVQANINNLASVPSIVYGILGSAVL--INF---FKMPRS---TA--L 280 (425)
Q Consensus 216 ia~~ia~pigv~~aiyl~e~a~~~~-----~~~~i~~~i~~la~vPSIv~Gl~gl~~~--~~~---~~~~~~---~~--l 280 (425)
T Consensus 188 ~~~~lA~~~~I~~s~~~~r~ak~rQ~~TGq~~~~~~~~~~LiiglPll~~~~~G~pl~~d~P~~~~FNl~GG~~v~PEf~ 267 (397)
T COG4597 188 IAFILALVMAIVASVFLARWAKTRQIATGQQFRTWPTAAVLIIGLPLLAQWLFGAPLTFDVPALGGFNLTGGMVVIPEFA 267 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCEECCCCCCCCCCCCCEEECHHHH
T ss_conf 79999999999999999999887787507857623568899845088999972897212052114435668705657899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89753345436689999999985110678989987077212777788397533258999
Q gi|254780705|r 281 VGGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTG 339 (425)
Q Consensus 281 ~g~~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g 339 (425)
T Consensus 268 aL~laLs~YTaaFIAEiVRaGI~~VskGQtEAa~sLGL~~~~t~RlVivPQAlRiIIPP 326 (397)
T COG4597 268 ALFLALSFYTAAFIAEIVRAGIQAVSKGQTEAARSLGLRSSLTLRLVIVPQALRIIIPP 326 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCEEECCC
T ss_conf 99999999999999999987650257661778986289975447999841101564176