HHsearch alignment for GI: 254780705 and conserved domain: PRK09497

>PRK09497 potB spermidine/putrescine ABC transporter membrane protein; Reviewed.
Probab=99.91  E-value=1.2e-22  Score=163.11  Aligned_cols=207  Identities=18%  Similarity=0.138  Sum_probs=158.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHH
Q ss_conf             0266789999999999999999999999999864373024567898998876533699999999999---------9862
Q gi|254780705|r  202 GIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVL---------INFF  272 (425)
Q Consensus       202 Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~---------~~~~  272 (425)
T Consensus        60 ~~~~~l~nSl~~a~~~tvi~~~ig~~~A~~l~~~~--~~~r~~~~~l~~~P~~~p~~v~~~~~~~~~~~~G~ln~~l~~l  137 (285)
T PRK09497         60 LYAEVLLHSLNMALIATLACLVLGYPFAWFLAKLP--HKVRPLLLFLLIVPFWTNSLIRIYGLKIFLGTKGYLNEFLLWL  137 (285)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
T ss_conf             99999999999999999999999999888630167--5438999999999998799999999999814330788999981


Q ss_pred             CCCC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             6663------0046897533454366899999999851106789899870772127777883975332589999999999
Q gi|254780705|r  273 KMPR------STALVGGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLAR  346 (425)
Q Consensus       273 ~~~~------~~~l~g~~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~r  346 (425)
T Consensus       138 g~~~~p~~~l~~~~~vii~~v~~~lPf~~l~l~a~l~~i~~~l~EAA~~lGAs~~~~F~~I~lPl~~Pgi~~~~il~fi~  217 (285)
T PRK09497        138 GVIDTPIRIMFTESAVIIGLVYILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLP  217 (285)
T ss_pred             CCCCCCHHHHCCHHHHHHHHHEEECHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHEEHHEEEHHHHHHHHHHHHHHHHH
T ss_conf             57566235423498887875313120677437878840896899999875999789132022081089999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             876779999985432101366561344557999999860366500699999999999999999999999999974104
Q gi|254780705|r  347 ALGETAPLLFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNRFKKR  424 (425)
Q Consensus       347 a~GEta~ll~~~~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r~~~~  424 (425)
T Consensus       218 s~~~F~~~~~lgG~~------------~~~l~~~i~~~~~~~~--~~~~aaA~svil~~i~~~~~~i~~r~~k~~~kk  281 (285)
T PRK09497        218 AMGMFYVSDLLGGAK------------NLLIGNVIKSQFLNIR--DWPFGAATSITLTIVMGLMLLVYYRASKLLNKK  281 (285)
T ss_pred             HHHHHHEEEECCCCC------------CCHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf             988762100104897------------5529999999998706--906999999999999999999999999995301