HHsearch alignment for GI: 254780705 and conserved domain: PRK09881
>PRK09881 ATP-dependent peptide transporter membrane subunit; Provisional.
Probab=99.51 E-value=1.4e-11 Score=92.50 Aligned_cols=202 Identities=17% Similarity=0.177 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 12026678999999999999999999999999986437302456789899887653369999999999998626663004
Q gi|254780705|r 200 VAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLINFFKMPRSTA 279 (425)
Q Consensus 200 ~~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~~~~~~~~~~ 279 (425)
T Consensus 90 l~G~r~sL~i~l~~~~i~~~iG~~lG~~aGy----~--gG~~D~il~ri~Dv~~aiP~lll~i~l~~----~~g---~~~ 156 (296)
T PRK09881 90 LVGSQQSILAGLVVVAIAGMIGSLLGCLSGV----L--GGRADAIIMRIMDIMLSIPSLVLTMALAA----ALG---PSL 156 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H--CCHHHHHHHHHHHHCCCCCCHHHHHHHHH----HHC---CCH
T ss_conf 8879999999999999999999999998888----1--76076655677763015860577788876----516---751
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68975334543668999999-99851106789899870772127777883975332589999999999876779999985
Q gi|254780705|r 280 LVGGLILALMTLPSIIIATG-VALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARALGETAPLLFVG 358 (425)
Q Consensus 280 l~g~~~l~~m~lP~i~~~~~-~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~ra~GEta~ll~~~ 358 (425)
T Consensus 157 ~~~il~i~l~~w~~~aR~vR~~~l~i~~~~yV~AAr~~G~s~~~Ii~rhiLPni~~~liv~~~~~~~~aIl~ea~LsFLG 236 (296)
T PRK09881 157 FNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIG 236 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 68889999987999999999999999634999999983988678541427666188999999999999999999999903
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 432101366561344557999999860366500699999999999999999999999999974104
Q gi|254780705|r 359 MVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNRFKKR 424 (425)
Q Consensus 359 ~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r~~~~ 424 (425)
T Consensus 237 lG~---~p------p~~sWG~mi~~~~~~~~~~~-w~~~~Pg~~i~l~vl~~nllgdgLrd~ldPr 292 (296)
T PRK09881 237 LGA---QQ------PSAEWGAMVANGRNYVLDQW-WYCAFPGAAILLTAVGFNLFGDGIRDLLDPK 292 (296)
T ss_pred CCC---CC------CCCCHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 789---99------99859999999999998772-9999999999999999999999999981965