HHsearch alignment of GI: 254780705 and MMDB domain: 3dhw_A_
>3dhw_A (A:) D-methionine transport system permease protein METI; ABC-transporter, methionine uptake transporter, membrane protein, amino-acid transport; 3.70A {Escherichia coli K12}
Probab=99.91 E-value=2.6e-23 Score=166.95 Aligned_cols=209 Identities=19% Similarity=0.165 Sum_probs=165.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 10120266789999999999999999999999999864373-----0245678989988765336999999999999862
Q gi|254780705|r 198 PEVAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHK-----GFFSSFVQANINNLASVPSIVYGILGSAVLINFF 272 (425)
Q Consensus 198 ~e~~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~-----~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~~~ 272 (425)
|-..-++.++..|+..+++++++++.+|+..|+.+..+..+ .++..........+.++|.+++..+.........
T Consensus 4 ~~~~~l~~~l~~tl~~~~~~~~i~~vig~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (217)
T 3dhw_A 4 PMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIV 83 (217)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGGGGGGTTCSSSCCSSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 89999999999999999999999999999999999998734432018999999999999999999999999998645520
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66630046897533454366899999999851106789899870772127777883975332589999999999876779
Q gi|254780705|r 273 KMPRSTALVGGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARALGETA 352 (425)
Q Consensus 273 ~~~~~~~l~g~~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~ra~GEta 352 (425)
+. ..+.....+++++...|++....+++++++|+++.|||.++|+|+||+++||++|.++|++++|.+++++++++|++
T Consensus 84 ~~-~~~~~~~ii~~~~~~~~~i~~~~~~~l~~i~~~~~eaA~~lG~s~~q~~~~v~lP~~~p~i~~~~~~~~~~~~~~~~ 162 (217)
T 3dhw_A 84 GT-SIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSA 162 (217)
T ss_dssp CC-SSSHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTTTHHHHHTCCTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 45-30188998988997246898999988886150277888606987421426730997699999999999999999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999985432101366561344557999999860366500699999999999999999999999999974104
Q gi|254780705|r 353 PLLFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNRFKKR 424 (425)
Q Consensus 353 ~ll~~~~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r~~~~ 424 (425)
...++|+.. ......+... .+.+ ....++.+++++++.++++.+...+++|++||
T Consensus 163 ~~~~ig~~~------------~~~~~~~~~~--~~~~---~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~rR 217 (217)
T 3dhw_A 163 MGGAVGAGG------------LGQIGYQYGY--IGYN---ATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK 217 (217)
T ss_dssp HCCSTTCCH------------HHHHHHHHHH--SSCC---TTHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHH------------HHHHHHHHHH--HHCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999998759------------9999999999--7501---89999999999999999999999999985699