RPSBLAST alignment for GI: 254780705 and conserved domain: pfam00528
>gnl|CDD|144205 pfam00528, BPD_transp_1, Binding-protein-dependent transport system inner membrane component. The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices. Length = 183
Score = 57.7 bits (140), Expect = 5e-09
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 24/204 (11%)
Query: 221 SFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLINFFKMPRSTAL 280
PLGI +A+ ++ I+ L ++PS V IL V+I+ + L
Sbjct: 1 GIPLGIIAALR-----RGRRLDRLLRPLIDLLQALPSFVLAIL--LVVISILSILGHGIL 53
Query: 281 VGGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGS 340
++ L + ALR++PS + AA LGAS+ Q +LP A+P ILTG
Sbjct: 54 PAIILALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGL 113
Query: 341 TVSLARALGETAPLLFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAI 400
++ ALG L F+G + +G+ I G +
Sbjct: 114 ALAFGGALGGAVLLEFLG-----SWPGLGLLLIEAILGYDY------------PEIQGPV 156
Query: 401 LLLLIFLAVINTAMLWLRNRFKKR 424
L + L ++N + L+ R
Sbjct: 157 LAAALILLLLNLLVDILQRLLDPR 180