HHsearch alignment for GI: 254780707 and conserved domain: PRK11205
>PRK11205 tbpA thiamine transporter substrate binding subunit; Provisional.
Probab=97.95 E-value=0.00056 Score=40.90 Aligned_cols=72 Identities=14% Similarity=0.163 Sum_probs=43.8
Q ss_pred HHHHHHHHCCCCCCCCEEEEEECCHHHH---HHHHHHHHHHHHCCCCEEEEEECCCCH-HHHHHHHHHCCCCCCCEEE
Q ss_conf 9999998314201376799980342589---999999999987798079998157620-5789885210133530121
Q gi|254780707|r 11 FVVLEVYCGTGTFARNRIRIAGSSTLFP---YSKIIAENFSEYFPEFKTPFVESGGSS-VGLKEFCRGIGDDTIDIVN 84 (346)
Q Consensus 11 ~~~l~~~~~~~~~a~~~I~i~GSst~~P---~~~~~a~~y~~~~~~~~~~~~~~~GSg-~Gi~~~~~G~~~~~~dig~ 84 (346)
T Consensus 4 ~~~~~~~~a~~~~~~~~l~vyt~dsf~~d~g~~~~l~~~Fek~t-GikV~~v-~~~dg~~ll~Rl~~Eg~np~ADVv~ 79 (326)
T PRK11205 4 CLPLLLLCAAPAFAKPVLTVYTYDSFAADWGPGPAVKKAFEAEC-GCELKFV-ALEDGVSLLNRLRLEGKNSKADVVL 79 (326)
T ss_pred HHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH-CCEEEEE-ECCCHHHHHHHHHHCCCCCCCCEEE
T ss_conf 66779986362002987999966544446686479999998987-9689999-6796799999999738999765899