HHsearch alignment for GI: 254780707 and conserved domain: PRK12682
>PRK12682 transcriptional regulator CysB-like protein; Reviewed.
Probab=97.58 E-value=0.0026 Score=37.22 Aligned_cols=201 Identities=11% Similarity=0.074 Sum_probs=111.2
Q ss_pred CCCEEEEEECCHHHH-HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCC
Q ss_conf 376799980342589-9999999999877980799981576205789885210133530121332024767876762487
Q gi|254780707|r 24 ARNRIRIAGSSTLFP-YSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHGV 102 (346)
Q Consensus 24 a~~~I~i~GSst~~P-~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~~ 102 (346)
T Consensus 91 ~~G~lrIg~~~~~~~~~lp~~l~~f~~~~P~v~l~-l~~~~~~~~~~~l~~g~----~Dl~i~~~~~~~~---------- 155 (309)
T PRK12682 91 DSGTLTIATTHTQARYVLPRVVAKFRKRYPKVNLS-LHQGSPDEIAQMVISGE----ADIGIATESLDDD---------- 155 (309)
T ss_pred CCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCEEE-EEECCHHHHHHHHHCCC----CCHHHHHCCCCCC----------
T ss_conf 77741212431333203862539999878983799-98378299999997699----7645650777789----------
Q ss_pred CCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHHHH
Q ss_conf 87246665215412554166654568888888764102555553236730232310011122450354488542357899
Q gi|254780707|r 103 SDIQEVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKHGTREVL 182 (346)
Q Consensus 103 ~~~~~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~SGT~~~F 182 (346)
T Consensus 156 ~~l~~~~l~~~~~~~v~~~~h~la~~----------------------~~i~~~dL----~~~p~I~~--~~~~~~r~~~ 207 (309)
T PRK12682 156 PDLVTLPCYDWTHAVIVPSDHPLAQK----------------------ERITLEDL----AEYPLITY--HPGFTGRSAI 207 (309)
T ss_pred CCEEEEEEECCCEEEEECCCCHHHCC----------------------CCCCHHHH----CCCCEEEE--CCCCCHHHHH
T ss_conf 88089993315236761699721149----------------------99999998----28997972--7998679999
Q ss_pred HHHHCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHC-CCCCC
Q ss_conf 98851345556541011111013660001344431024664021166236777631015321001332001100-11100
Q gi|254780707|r 183 EKKVLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNN-ADVLK 261 (346)
Q Consensus 183 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~-~~~~~ 261 (346)
T Consensus 208 ~~~~~~~g~~-----------------------------p~~~~~~~~~~~~~~~v~-~G~Gi~~lp~~~~~~~~~~~Lv 257 (309)
T PRK12682 208 DKAFAAAGLQ-----------------------------PDIVLEAIDSDVIKTYVR-LGLGVGIIAEMAYRPDRDGDLV 257 (309)
T ss_pred HHHHHHCCCC-----------------------------CCEEEEECCHHHHHHHHH-HCCEEEHHHHHHHHHHHCCCEE
T ss_conf 9999977999-----------------------------626999998999999999-5994242289983376479989
Q ss_pred CCCCCCCCCCHHHHCCCCCC-CEEEEEEEEECCCCCCCHHHHHHHHHHHCH
Q ss_conf 13445767895560279875-036789997078856688999999997498
Q gi|254780707|r 262 LVPIDGIVPSMGTIVSGLYP-ISRPLLFYVKRQHFNSVLGLREYVSFSVSD 311 (346)
Q Consensus 262 ~~~~~~v~p~~~~i~~g~YP-l~r~ly~yv~~~~~~~~~~~~~Fl~~~ls~ 311 (346)
T Consensus 258 ~v~~-------------~~~~~~~~~~l~~r-k~~~l~~~~~~FId~l~e~ 294 (309)
T PRK12682 258 ALPA-------------GHLFGPNTAWVAVK-RGAYLRNYVYDFIELLAPH 294 (309)
T ss_pred EEEC-------------CCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHHH
T ss_conf 9979-------------88777617999996-9661189999999999987