HHsearch alignment for GI: 254780707 and conserved domain: PRK12682

>PRK12682 transcriptional regulator CysB-like protein; Reviewed.
Probab=97.58  E-value=0.0026  Score=37.22  Aligned_cols=201  Identities=11%  Similarity=0.074  Sum_probs=111.2

Q ss_pred             CCCEEEEEECCHHHH-HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCC
Q ss_conf             376799980342589-9999999999877980799981576205789885210133530121332024767876762487
Q gi|254780707|r   24 ARNRIRIAGSSTLFP-YSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHGV  102 (346)
Q Consensus        24 a~~~I~i~GSst~~P-~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~~  102 (346)
T Consensus        91 ~~G~lrIg~~~~~~~~~lp~~l~~f~~~~P~v~l~-l~~~~~~~~~~~l~~g~----~Dl~i~~~~~~~~----------  155 (309)
T PRK12682         91 DSGTLTIATTHTQARYVLPRVVAKFRKRYPKVNLS-LHQGSPDEIAQMVISGE----ADIGIATESLDDD----------  155 (309)
T ss_pred             CCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCEEE-EEECCHHHHHHHHHCCC----CCHHHHHCCCCCC----------
T ss_conf             77741212431333203862539999878983799-98378299999997699----7645650777789----------


Q ss_pred             CCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHHHH
Q ss_conf             87246665215412554166654568888888764102555553236730232310011122450354488542357899
Q gi|254780707|r  103 SDIQEVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKHGTREVL  182 (346)
Q Consensus       103 ~~~~~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~SGT~~~F  182 (346)
T Consensus       156 ~~l~~~~l~~~~~~~v~~~~h~la~~----------------------~~i~~~dL----~~~p~I~~--~~~~~~r~~~  207 (309)
T PRK12682        156 PDLVTLPCYDWTHAVIVPSDHPLAQK----------------------ERITLEDL----AEYPLITY--HPGFTGRSAI  207 (309)
T ss_pred             CCEEEEEEECCCEEEEECCCCHHHCC----------------------CCCCHHHH----CCCCEEEE--CCCCCHHHHH
T ss_conf             88089993315236761699721149----------------------99999998----28997972--7998679999


Q ss_pred             HHHHCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHC-CCCCC
Q ss_conf             98851345556541011111013660001344431024664021166236777631015321001332001100-11100
Q gi|254780707|r  183 EKKVLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNN-ADVLK  261 (346)
Q Consensus       183 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~-~~~~~  261 (346)
T Consensus       208 ~~~~~~~g~~-----------------------------p~~~~~~~~~~~~~~~v~-~G~Gi~~lp~~~~~~~~~~~Lv  257 (309)
T PRK12682        208 DKAFAAAGLQ-----------------------------PDIVLEAIDSDVIKTYVR-LGLGVGIIAEMAYRPDRDGDLV  257 (309)
T ss_pred             HHHHHHCCCC-----------------------------CCEEEEECCHHHHHHHHH-HCCEEEHHHHHHHHHHHCCCEE
T ss_conf             9999977999-----------------------------626999998999999999-5994242289983376479989


Q ss_pred             CCCCCCCCCCHHHHCCCCCC-CEEEEEEEEECCCCCCCHHHHHHHHHHHCH
Q ss_conf             13445767895560279875-036789997078856688999999997498
Q gi|254780707|r  262 LVPIDGIVPSMGTIVSGLYP-ISRPLLFYVKRQHFNSVLGLREYVSFSVSD  311 (346)
Q Consensus       262 ~~~~~~v~p~~~~i~~g~YP-l~r~ly~yv~~~~~~~~~~~~~Fl~~~ls~  311 (346)
T Consensus       258 ~v~~-------------~~~~~~~~~~l~~r-k~~~l~~~~~~FId~l~e~  294 (309)
T PRK12682        258 ALPA-------------GHLFGPNTAWVAVK-RGAYLRNYVYDFIELLAPH  294 (309)
T ss_pred             EEEC-------------CCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHHH
T ss_conf             9979-------------88777617999996-9661189999999999987