HHsearch alignment for GI: 254780707 and conserved domain: TIGR00971

>TIGR00971 3a0106s03 sulfate ABC transporter, sulfate-binding protein; InterPro: IPR005669 Thiosulphate-binding proteins (gene cysP) specifically binds thiosulphate and are involved in the transport systems for this nutrients , . There are two conserved regions in the protein, one located in the N-terminal region and the other in the central part of these proteins. The second pattern includes two adjacent amino acids (Ser-Gly) that, in sbp, are known to be essential for sulphate binding . ; GO: 0015419 sulfate transmembrane-transporting ATPase activity, 0008272 sulfate transport, 0030288 outer membrane-bounded periplasmic space.
Probab=95.84  E-value=0.11  Score=28.08  Aligned_cols=249  Identities=14%  Similarity=0.153  Sum_probs=123.2

Q ss_pred             EEEEECCHHHHHHHHH-HHHHHHHCCCCEEEEEECC-CCHHHHHHHHHHCCCCCCCEEECC-------C-CCCHHHHHHH
Q ss_conf             9998034258999999-9999987798079998157-620578988521013353012133-------2-0247678767
Q gi|254780707|r   28 IRIAGSSTLFPYSKII-AENFSEYFPEFKTPFVESG-GSSVGLKEFCRGIGDDTIDIVNSS-------R-KITQNELDEC   97 (346)
Q Consensus        28 I~i~GSst~~P~~~~~-a~~y~~~~~~~~~~~~~~~-GSg~Gi~~~~~G~~~~~~dig~ss-------r-~l~~~E~~~~   97 (346)
T Consensus        19 ~SYD~~RELy~~~N~~F~~~W~~~~GGD~~~i~QSH~gs~KQA~~v~~G~~ADvVT~~~~~DV~~~~~~G~lI~~~W~~r   98 (320)
T TIGR00971        19 VSYDVTRELYEQYNKAFEAHWKKDTGGDKVVIKQSHGGSGKQALSVLNGLEADVVTLALAYDVQILAERGRLIDKDWIKR   98 (320)
T ss_pred             CCCCHHHHHHHHHCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf             23331069998718157875666448954789742688606889987001255778888876899984387365468862


Q ss_pred             HHCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCC-
Q ss_conf             6248787246665215412554166654568888888764102555553236730232310011122450354488542-
Q gi|254780707|r   98 KKHGVSDIQEVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKH-  176 (346)
Q Consensus        98 ~~~~~~~~~~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~S-  176 (346)
T Consensus        99 LP~NS~P------y~ST~~FLVRKGNP-------------------------K~I~DWnDL~----~~~v~~I~PNPK~S  143 (320)
T TIGR00971        99 LPDNSAP------YTSTIVFLVRKGNP-------------------------KQIHDWNDLI----KPGVSVITPNPKSS  143 (320)
T ss_pred             CCCCCCC------CCEEEEEEEECCCC-------------------------CCCCCHHHHH----HCCCEEEECCCCCC
T ss_conf             8787886------20133556754798-------------------------9646513463----35875860788986


Q ss_pred             C-HHHHHH----HHHCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             3-578999----88513455565410111110136600013444310246640211662367776310153210013320
Q gi|254780707|r  177 G-TREVLE----KKVLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLS  251 (346)
Q Consensus       177 G-T~~~F~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~  251 (346)
T Consensus       144 G~AR~~YLaAWG~A~~~~~~D~aK~~~F~~~l~K--------------N----vEVl-D~G~RGaT~TF~ERG~GDVLI~  204 (320)
T TIGR00971       144 GGARYNYLAAWGYALHADNGDKAKAEQFVKALLK--------------N----VEVL-DSGARGATNTFVERGLGDVLIA  204 (320)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC--------------C----EEEE-ECCCCCCCCCHHHCCCCHHHHH
T ss_conf             4157899998766751378762458999999850--------------1----0332-0688865210111063300134


Q ss_pred             HHHHCCCCCCCC---CCCCCCCCHHHHCCCCCCCEEEEEEEEEC--CCCCCCHHHHHHHHHHHCHHHCCCCCHHHHCCCC
Q ss_conf             011001110013---44576789556027987503678999707--8856688999999997498740522027755963
Q gi|254780707|r  252 FYKNNADVLKLV---PIDGIVPSMGTIVSGLYPISRPLLFYVKR--QHFNSVLGLREYVSFSVSDEMMAPDSQLFQYGLI  326 (346)
Q Consensus       252 ~~~~~~~~~~~~---~~~~v~p~~~~i~~g~YPl~r~ly~yv~~--~~~~~~~~~~~Fl~~~ls~~~~~~~~~~~~~Gyv  326 (346)
T Consensus       205 ~E~E~~~~~~~~~~~~FE~V~P~~-~ILA-E~~V~-----~VDK~V~~~~T~~~A~AYL~yLYSP~~Q~---I~~~~yYR  274 (320)
T TIGR00971       205 FENEALLIRKELEKDKFEIVIPSE-SILA-EPTVS-----VVDKVVEKKGTKKVAEAYLKYLYSPEGQE---IIAKNYYR  274 (320)
T ss_pred             HHHHHHHHHHHHCCCCCEEECCCC-CCCC-CCCEE-----EEECCCCCCCHHHHHHHHHHHHCCCCHHH---HHHHCCCC
T ss_conf             578899999963348726864774-3213-56503-----57433032345899999997404941356---76542678


Q ss_pred             CCCHHHHHHHHHHH
Q ss_conf             48999999999999
Q gi|254780707|r  327 PISNEERKSVRDSI  340 (346)
Q Consensus       327 PLp~~~~~~~~~~~  340 (346)
T Consensus       275 ~~~~~v~~K~~~~F  288 (320)
T TIGR00971       275 VRDAEVAKKYEDKF  288 (320)
T ss_pred             CCCHHHHHHHHCCC
T ss_conf             88888986775168