HHsearch results for GI: 254780707 and protein with PDBid: 1atg_A

>1atg_A MODA, periplasmic molybdate-binding protein; tungstate, ABC transporter; 1.20A {Azotobacter vinelandii} SCOP: c.94.1.1
Probab=99.33  E-value=1.2e-10  Score=76.78  Aligned_cols=229  Identities=12%  Similarity=0.081  Sum_probs=119.7

Q ss_pred             EEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCE
Q ss_conf             79998034258999999999998779807999815762057898852101335301213320247678767624878724
Q gi|254780707|r   27 RIRIAGSSTLFPYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHGVSDIQ  106 (346)
Q Consensus        27 ~I~i~GSst~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~~~~~~  106 (346)
                      .|++.++++..+.++.+++.|++++ +++| .+..+|||..++++.+|.   ..|+..+..+....++...  .......
T Consensus         1 el~v~~~~~~~~~~~~l~~~Fek~t-Gi~V-~~~~g~sg~l~~~i~~g~---~~D~~~~~~~~~~~~~~~~--g~~~~~~   73 (231)
T 1atg_A            1 ELKVVTATNFLGTLEQLAGQFAKQT-GHAV-VISSGSSGPVYAQIVNGA---PYNVFFSADEKSPEKLDNQ--GFALPGS   73 (231)
T ss_dssp             CEEEEEEGGGHHHHHHHHHHHHHHH-CCCE-EEEEECHHHHHHHHHTTC---CCSEEECSSSHHHHHHHHT--TCBCTTC
T ss_pred             CEEEEEECCHHHHHHHHHHHHHHHH-CCEE-EEEECCHHHHHHHHHCCC---CCCEEEECCHHHHHHHHHH--CCCCCCC
T ss_conf             9799995166999999999999852-9889-999888899999998499---9849996666667889861--4423464


Q ss_pred             EEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHH
Q ss_conf             66652154125541666545688888887641025555532367302323100111224503544885423578999885
Q gi|254780707|r  107 EVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKHGTREVLEKKV  186 (346)
Q Consensus       107 ~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~SGT~~~F~~~v  186 (346)
                      ........+++....+++                          ....|.++..  |......+..+..++.-..+....
T Consensus        74 ~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~l~~--~~~~~i~~~~p~~~~~g~~~~~~~  125 (231)
T 1atg_A           74 RFTYAIGKLVLWSAKPGL--------------------------VDNQGKVLAG--NGWRHIAISNPQIAPYGLAGTQVL  125 (231)
T ss_dssp             CEEEEECCEEEEESSTTT--------------------------SCTTSGGGGS--SSCSCEEEECTTTCHHHHHHHHHH
T ss_pred             EEEEECCEEEEEECCCCC--------------------------CCCCHHHHCC--CCCCEEEEECCCCCCCHHHHHHHH
T ss_conf             267630228986247777--------------------------8886888277--547879996898782068999999


Q ss_pred             CCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCC
Q ss_conf             13455565410111110136600013444310246640211662367776310153210013320011001110013445
Q gi|254780707|r  187 LQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNADVLKLVPID  266 (346)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~~~~~~~~~~~  266 (346)
                      .......     ..        ...           ..+...+........+......+|++..+...........  ..
T Consensus       126 ~~~~~~~-----~~--------~~~-----------~~~~~~~~~~~~~~~v~~g~~~~~~~~~s~~~~~~~~~~~--~~  179 (231)
T 1atg_A          126 THLGLLD-----KL--------TAQ-----------ERIVEANSVGQAHSQTASGAADLGFVALAQIIQAAAKIPG--SH  179 (231)
T ss_dssp             HHTTCHH-----HH--------HHT-----------TCEEEESSHHHHHHHHHTTSSSEEEEEGGGTCCTTSCCSS--EE
T ss_pred             HHCCCHH-----HH--------HHH-----------HCEEECCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCC--EE
T ss_conf             8728225-----55--------543-----------1062102314788888707753451057788987643686--04


Q ss_pred             CCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCHHHCCCCCHHHHCCCCC
Q ss_conf             7678955602798750367899970788566889999999974987405220277559634
Q gi|254780707|r  267 GIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVSDEMMAPDSQLFQYGLIP  327 (346)
Q Consensus       267 ~v~p~~~~i~~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~ls~~~~~~~~~~~~~GyvP  327 (346)
                      .+.|     .++..|+.++.-+..+   ....++.++|++|++|+++|.   ++.+.||.+
T Consensus       180 ~~~~-----~~~~~~~~~~~~i~~~---a~n~~~A~~FidfL~S~e~Q~---i~~~~Gf~~  229 (231)
T 1atg_A          180 WFPP-----ANYYEPIVQQAVITKS---TAEKANAEQFMSWMKGPKAVA---IIKAAGYVL  229 (231)
T ss_dssp             ECCC-----GGGSCCCEEEEEEBTT---CSCHHHHHHHHHHTTSHHHHH---HHHHTTCBC
T ss_pred             EECC-----CCCCEEEEEEEEEECC---CCCHHHHHHHHHHHCCHHHHH---HHHHHCCCC
T ss_conf             4158-----6667055677999859---999799999999978999999---999848989