HHsearch results for GI: 254780707 and protein with PDBid: 1atg_A
>1atg_A MODA, periplasmic molybdate-binding protein; tungstate, ABC transporter; 1.20A {Azotobacter vinelandii} SCOP: c.94.1.1
Probab=99.33 E-value=1.2e-10 Score=76.78 Aligned_cols=229 Identities=12% Similarity=0.081 Sum_probs=119.7
Q ss_pred EEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCE
Q ss_conf 79998034258999999999998779807999815762057898852101335301213320247678767624878724
Q gi|254780707|r 27 RIRIAGSSTLFPYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHGVSDIQ 106 (346)
Q Consensus 27 ~I~i~GSst~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~~~~~~ 106 (346)
.|++.++++..+.++.+++.|++++ +++| .+..+|||..++++.+|. ..|+..+..+....++... .......
T Consensus 1 el~v~~~~~~~~~~~~l~~~Fek~t-Gi~V-~~~~g~sg~l~~~i~~g~---~~D~~~~~~~~~~~~~~~~--g~~~~~~ 73 (231)
T 1atg_A 1 ELKVVTATNFLGTLEQLAGQFAKQT-GHAV-VISSGSSGPVYAQIVNGA---PYNVFFSADEKSPEKLDNQ--GFALPGS 73 (231)
T ss_dssp CEEEEEEGGGHHHHHHHHHHHHHHH-CCCE-EEEEECHHHHHHHHHTTC---CCSEEECSSSHHHHHHHHT--TCBCTTC
T ss_pred CEEEEEECCHHHHHHHHHHHHHHHH-CCEE-EEEECCHHHHHHHHHCCC---CCCEEEECCHHHHHHHHHH--CCCCCCC
T ss_conf 9799995166999999999999852-9889-999888899999998499---9849996666667889861--4423464
Q ss_pred EEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHH
Q ss_conf 66652154125541666545688888887641025555532367302323100111224503544885423578999885
Q gi|254780707|r 107 EVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKHGTREVLEKKV 186 (346)
Q Consensus 107 ~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~SGT~~~F~~~v 186 (346)
........+++....+++ ....|.++.. |......+..+..++.-..+....
T Consensus 74 ~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~l~~--~~~~~i~~~~p~~~~~g~~~~~~~ 125 (231)
T 1atg_A 74 RFTYAIGKLVLWSAKPGL--------------------------VDNQGKVLAG--NGWRHIAISNPQIAPYGLAGTQVL 125 (231)
T ss_dssp CEEEEECCEEEEESSTTT--------------------------SCTTSGGGGS--SSCSCEEEECTTTCHHHHHHHHHH
T ss_pred EEEEECCEEEEEECCCCC--------------------------CCCCHHHHCC--CCCCEEEEECCCCCCCHHHHHHHH
T ss_conf 267630228986247777--------------------------8886888277--547879996898782068999999
Q ss_pred CCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCC
Q ss_conf 13455565410111110136600013444310246640211662367776310153210013320011001110013445
Q gi|254780707|r 187 LQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNADVLKLVPID 266 (346)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~~~~~~~~~~~ 266 (346)
....... .. ... ..+...+........+......+|++..+........... ..
T Consensus 126 ~~~~~~~-----~~--------~~~-----------~~~~~~~~~~~~~~~v~~g~~~~~~~~~s~~~~~~~~~~~--~~ 179 (231)
T 1atg_A 126 THLGLLD-----KL--------TAQ-----------ERIVEANSVGQAHSQTASGAADLGFVALAQIIQAAAKIPG--SH 179 (231)
T ss_dssp HHTTCHH-----HH--------HHT-----------TCEEEESSHHHHHHHHHTTSSSEEEEEGGGTCCTTSCCSS--EE
T ss_pred HHCCCHH-----HH--------HHH-----------HCEEECCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCC--EE
T ss_conf 8728225-----55--------543-----------1062102314788888707753451057788987643686--04
Q ss_pred CCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCHHHCCCCCHHHHCCCCC
Q ss_conf 7678955602798750367899970788566889999999974987405220277559634
Q gi|254780707|r 267 GIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVSDEMMAPDSQLFQYGLIP 327 (346)
Q Consensus 267 ~v~p~~~~i~~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~ls~~~~~~~~~~~~~GyvP 327 (346)
.+.| .++..|+.++.-+..+ ....++.++|++|++|+++|. ++.+.||.+
T Consensus 180 ~~~~-----~~~~~~~~~~~~i~~~---a~n~~~A~~FidfL~S~e~Q~---i~~~~Gf~~ 229 (231)
T 1atg_A 180 WFPP-----ANYYEPIVQQAVITKS---TAEKANAEQFMSWMKGPKAVA---IIKAAGYVL 229 (231)
T ss_dssp ECCC-----GGGSCCCEEEEEEBTT---CSCHHHHHHHHHHTTSHHHHH---HHHHTTCBC
T ss_pred EECC-----CCCCEEEEEEEEEECC---CCCHHHHHHHHHHHCCHHHHH---HHHHHCCCC
T ss_conf 4158-----6667055677999859---999799999999978999999---999848989