HHsearch results for GI: 254780707 and protein with PDBid: 2fyi_A
>2fyi_A HTH-type transcriptional regulator CBL; Lys-R family, cofactor-binding domain, cysteine biosynthesis; 2.80A {Escherichia coli K12} SCOP: c.94.1.1
Probab=98.17 E-value=0.00024 Score=41.73 Aligned_cols=203 Identities=13% Similarity=0.069 Sum_probs=119.6
Q ss_pred CCCCEEEEEECCHHHH-HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCC
Q ss_conf 1376799980342589-999999999987798079998157620578988521013353012133202476787676248
Q gi|254780707|r 23 FARNRIRIAGSSTLFP-YSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHG 101 (346)
Q Consensus 23 ~a~~~I~i~GSst~~P-~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~ 101 (346)
..+++|+|+-+.++.. ++..+..+|++.||++++. +....+..-.+.+.+|. +|+|....++.+.
T Consensus 11 ~~~G~lrIg~~~~~a~~~Lp~~l~~f~~~~P~i~l~-i~~~~~~~l~~~L~~g~----~D~ai~~~~~~~~--------- 76 (228)
T 2fyi_A 11 DTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLE-LIQGTPQEIATLLQNGE----ADIGIASERLSND--------- 76 (228)
T ss_dssp TCCEEEEEEECHHHHHHTHHHHHHHHHHHCTTEEEE-EEECCHHHHHHHHHHTS----CSEEEESSSSTTC---------
T ss_pred CCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEE-EEECCCHHHHHHHHCCC----CCEEEEECCCCCC---------
T ss_conf 997179999758899999999999999988994899-99676599999986688----3323331123568---------
Q ss_pred CCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHHH
Q ss_conf 78724666521541255416665456888888876410255555323673023231001112245035448854235789
Q gi|254780707|r 102 VSDIQEVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKHGTREV 181 (346)
Q Consensus 102 ~~~~~~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~SGT~~~ 181 (346)
..+...++..+.+++++.++.+.... +...|.|+ .+.|+..+ +++++++..
T Consensus 77 -~~~~~~~l~~~~~~~v~~~~~~~~~~----------------------~~i~~~dL----~~~p~i~~--~~~~~~~~~ 127 (228)
T 2fyi_A 77 -PQLVAFPWFRWHHSLLVPHDHPLTQI----------------------SPLTLESI----AKWPLITY--RQGITGRSR 127 (228)
T ss_dssp -TTEEEEEEEEECEEEEEETTCGGGTS----------------------SSCCHHHH----TTSCEEEE--CTTSTTHHH
T ss_pred -CCCEEEEEEECCCCEECCCCCCCCCC----------------------CCCCHHHH----HCCCCCCC--CCCCCHHHH
T ss_conf -65336773203430113564200034----------------------44447887----25972126--899817888
Q ss_pred HHHHHCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 99885134555654101111101366000134443102466402116623677763101532100133200110011100
Q gi|254780707|r 182 LEKKVLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNADVLK 261 (346)
Q Consensus 182 F~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~~~~~~ 261 (346)
+.+.....+... ...-..++...+...+ ....++++++....... ..-.
T Consensus 128 ~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~v-~~g~gi~~lp~~~~~~~-~~~~ 176 (228)
T 2fyi_A 128 IDDAFARKGLLA-----------------------------DIVLSAQDSDVIKTYV-ALGLGIGLVAEQSSGEQ-EEEN 176 (228)
T ss_dssp HHHHHHHTTCCC-----------------------------CEEEEESSHHHHHHHH-HHTSCEEEEEGGGGSTT-CCTT
T ss_pred HHHHHHHCCCCC-----------------------------CEEEEECCHHHHHHHH-HCCCEEEECCHHHHHHH-HCCC
T ss_conf 998765038777-----------------------------5347847899999998-65999998639998565-4599
Q ss_pred CCCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 1344576789556027987503678999707885668899999999749
Q gi|254780707|r 262 LVPIDGIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVS 310 (346)
Q Consensus 262 ~~~~~~v~p~~~~i~~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~ls 310 (346)
. + .+....++..+.+|++.+++ ....+.++.|++++-.
T Consensus 177 l-----v-----~l~~~~~~~~~~~~l~~~~~-~~~~~~~~~Fi~~~~~ 214 (228)
T 2fyi_A 177 L-----I-----RLDTRHLFDANTVWLGLKRG-QLQRNYVWRFLELCNA 214 (228)
T ss_dssp E-----E-----EECCTTTSCCEEEEEEEETT-CCBCHHHHHHHHHHCS
T ss_pred E-----E-----EEECCCCCCCEEEEEEEECC-CCCCHHHHHHHHHHHH
T ss_conf 8-----9-----99687777640899999896-8679999999999986