HHsearch results for GI: 254780707 and protein with PDBid: 2hxr_A

>2hxr_A HTH-type transcriptional regulator CYNR; CYNR transcriptional regulator LYSR structural genomics, PSI-2, protein structure initiative; 2.05A {Escherichia coli K12} PDB: 3hfu_A
Probab=97.94  E-value=0.00045  Score=40.20  Aligned_cols=201  Identities=12%  Similarity=0.205  Sum_probs=116.8

Q ss_pred             CCCEEEEEECCHHHH-HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCC
Q ss_conf             376799980342589-9999999999877980799981576205789885210133530121332024767876762487
Q gi|254780707|r   24 ARNRIRIAGSSTLFP-YSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHGV  102 (346)
Q Consensus        24 a~~~I~i~GSst~~P-~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~~  102 (346)
                      .+++|+|+-+.++.. ++..+..+|.+.||++.+. +....+..-++.+.+|.    +|+|....+..+.+         
T Consensus        28 ~~g~l~Ig~~~~~~~~~l~~~l~~f~~~~P~i~l~-i~~~~~~~l~~~l~~g~----~D~~i~~~~~~~~~---------   93 (238)
T 2hxr_A           28 TRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQ-LQEMSQEKIEDMLCRDE----LDVGIAFAPVHSPE---------   93 (238)
T ss_dssp             ---CEEEEECHHHHTTTHHHHHHHHHHHCTTSCEE-EEECCHHHHHHHHHTTS----CSEEEEESSCCCTT---------
T ss_pred             CCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEE-EECCCHHHHHHHHHCCC----CHHHHHCCCCCCCC---------
T ss_conf             84289999537899999999999999988998899-73288799999998698----30012025544310---------


Q ss_pred             CCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHHHH
Q ss_conf             87246665215412554166654568888888764102555553236730232310011122450354488542357899
Q gi|254780707|r  103 SDIQEVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKHGTREVL  182 (346)
Q Consensus       103 ~~~~~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~SGT~~~F  182 (346)
                        +...++..+.++++++++.+...                      .+...|.|+    .+.|...+  ++++++++.+
T Consensus        94 --~~~~~l~~~~~~~~~~~~hpla~----------------------~~~i~~~dL----~~~~~i~~--~~~~~~~~~~  143 (238)
T 2hxr_A           94 --LEAIPLLTESLALVVAQHHPLAV----------------------HEQVALSRL----HDEKLVLL--SAEFATREQI  143 (238)
T ss_dssp             --EEEEEEEEEEEEEEEETTSGGGG----------------------CSEECGGGG----GGCEEEEE--CTTSHHHHHH
T ss_pred             --HHHHHHHHHHHHHCCCCHHHHHH----------------------CCCCCHHHH----HCCCEEEE--CCCCCHHHHH
T ss_conf             --43333455422321320046654----------------------035879998----13968984--8998579999


Q ss_pred             HHHHCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCC
Q ss_conf             98851345556541011111013660001344431024664021166236777631015321001332001100111001
Q gi|254780707|r  183 EKKVLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNADVLKL  262 (346)
Q Consensus       183 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~~~~~~~  262 (346)
                      .+.+...+...                             ...-..++...+.+.+... .+++.++....... .....
T Consensus       144 ~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~v~~g-~gi~~~p~~~~~~~-~~~~~  192 (238)
T 2hxr_A          144 DHYCEKAGLHP-----------------------------QVVIEANSISAVLELIRRT-SLSTLLPAAIATQH-DGLKA  192 (238)
T ss_dssp             HHHHHHTTCCC-----------------------------EEEEEESCHHHHHHHHHHS-SCBEEEETHHHHHC-TTEEE
T ss_pred             HHHHHHCCCCC-----------------------------CEEECCCCHHHHHHHHHHC-CEEEEEHHHHHHHC-CCCEE
T ss_conf             99999769987-----------------------------5212368779999999939-97997029986037-89339


Q ss_pred             CCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCHH
Q ss_conf             34457678955602798750367899970788566889999999974987
Q gi|254780707|r  263 VPIDGIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVSDE  312 (346)
Q Consensus       263 ~~~~~v~p~~~~i~~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~ls~~  312 (346)
                      +++.            .-++.+++|++.++. ....++++.|++++...-
T Consensus       193 ~~~~------------~~~~~~~~~li~~~~-~~~s~~~~~fi~~~~e~~  229 (238)
T 2hxr_A          193 ISLA------------PPLLERTAVLLRRKN-SWQTAAAKAFLHMALDKC  229 (238)
T ss_dssp             EEES------------SCSCEEEEEEEEETT-SCCCHHHHHHHHHHHHHH
T ss_pred             EECC------------CCCCEEEEEEEEECC-CCCCHHHHHHHHHHHHHH
T ss_conf             9788------------998624999999895-978999999999999998