HHsearch results for GI: 254780707 and protein with PDBid: 2hxr_A
>2hxr_A HTH-type transcriptional regulator CYNR; CYNR transcriptional regulator LYSR structural genomics, PSI-2, protein structure initiative; 2.05A {Escherichia coli K12} PDB: 3hfu_A
Probab=97.94 E-value=0.00045 Score=40.20 Aligned_cols=201 Identities=12% Similarity=0.205 Sum_probs=116.8
Q ss_pred CCCEEEEEECCHHHH-HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCC
Q ss_conf 376799980342589-9999999999877980799981576205789885210133530121332024767876762487
Q gi|254780707|r 24 ARNRIRIAGSSTLFP-YSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHGV 102 (346)
Q Consensus 24 a~~~I~i~GSst~~P-~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~~ 102 (346)
.+++|+|+-+.++.. ++..+..+|.+.||++.+. +....+..-++.+.+|. +|+|....+..+.+
T Consensus 28 ~~g~l~Ig~~~~~~~~~l~~~l~~f~~~~P~i~l~-i~~~~~~~l~~~l~~g~----~D~~i~~~~~~~~~--------- 93 (238)
T 2hxr_A 28 TRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQ-LQEMSQEKIEDMLCRDE----LDVGIAFAPVHSPE--------- 93 (238)
T ss_dssp ---CEEEEECHHHHTTTHHHHHHHHHHHCTTSCEE-EEECCHHHHHHHHHTTS----CSEEEEESSCCCTT---------
T ss_pred CCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEE-EECCCHHHHHHHHHCCC----CHHHHHCCCCCCCC---------
T ss_conf 84289999537899999999999999988998899-73288799999998698----30012025544310---------
Q ss_pred CCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHHHH
Q ss_conf 87246665215412554166654568888888764102555553236730232310011122450354488542357899
Q gi|254780707|r 103 SDIQEVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPSGKHGTREVL 182 (346)
Q Consensus 103 ~~~~~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~~~SGT~~~F 182 (346)
+...++..+.++++++++.+... .+...|.|+ .+.|...+ ++++++++.+
T Consensus 94 --~~~~~l~~~~~~~~~~~~hpla~----------------------~~~i~~~dL----~~~~~i~~--~~~~~~~~~~ 143 (238)
T 2hxr_A 94 --LEAIPLLTESLALVVAQHHPLAV----------------------HEQVALSRL----HDEKLVLL--SAEFATREQI 143 (238)
T ss_dssp --EEEEEEEEEEEEEEEETTSGGGG----------------------CSEECGGGG----GGCEEEEE--CTTSHHHHHH
T ss_pred --HHHHHHHHHHHHHCCCCHHHHHH----------------------CCCCCHHHH----HCCCEEEE--CCCCCHHHHH
T ss_conf --43333455422321320046654----------------------035879998----13968984--8998579999
Q ss_pred HHHHCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCC
Q ss_conf 98851345556541011111013660001344431024664021166236777631015321001332001100111001
Q gi|254780707|r 183 EKKVLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNADVLKL 262 (346)
Q Consensus 183 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~~~~~~~ 262 (346)
.+.+...+... ...-..++...+.+.+... .+++.++....... .....
T Consensus 144 ~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~v~~g-~gi~~~p~~~~~~~-~~~~~ 192 (238)
T 2hxr_A 144 DHYCEKAGLHP-----------------------------QVVIEANSISAVLELIRRT-SLSTLLPAAIATQH-DGLKA 192 (238)
T ss_dssp HHHHHHTTCCC-----------------------------EEEEEESCHHHHHHHHHHS-SCBEEEETHHHHHC-TTEEE
T ss_pred HHHHHHCCCCC-----------------------------CEEECCCCHHHHHHHHHHC-CEEEEEHHHHHHHC-CCCEE
T ss_conf 99999769987-----------------------------5212368779999999939-97997029986037-89339
Q ss_pred CCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCHH
Q ss_conf 34457678955602798750367899970788566889999999974987
Q gi|254780707|r 263 VPIDGIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVSDE 312 (346)
Q Consensus 263 ~~~~~v~p~~~~i~~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~ls~~ 312 (346)
+++. .-++.+++|++.++. ....++++.|++++...-
T Consensus 193 ~~~~------------~~~~~~~~~li~~~~-~~~s~~~~~fi~~~~e~~ 229 (238)
T 2hxr_A 193 ISLA------------PPLLERTAVLLRRKN-SWQTAAAKAFLHMALDKC 229 (238)
T ss_dssp EEES------------SCSCEEEEEEEEETT-SCCCHHHHHHHHHHHHHH
T ss_pred EECC------------CCCCEEEEEEEEECC-CCCCHHHHHHHHHHHHHH
T ss_conf 9788------------998624999999895-978999999999999998