HHsearch results for GI: 254780707 and protein with PDBid: 2hxw_A

>2hxw_A Major antigenic peptide PEB3; periplasmic binding protein, N-glycosylation, structural genomics; HET: FLC; 1.60A {Campylobacter jejuni} PDB: 3fjm_A 3fjg_A 3fir_A* 3fj7_A*
Probab=99.60  E-value=2.4e-14  Score=97.42  Aligned_cols=228  Identities=11%  Similarity=0.106  Sum_probs=127.1

Q ss_pred             EEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCE
Q ss_conf             79998034258999999999998779807999815762057898852101335301213320247678767624878724
Q gi|254780707|r   27 RIRIAGSSTLFPYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHGVSDIQ  106 (346)
Q Consensus        27 ~I~i~GSst~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~~~~~~  106 (346)
                      .|+|-|+.++.|.++.+++.|++++ +++| .+..+||+...+++..|     .|+..++.+....++..........-.
T Consensus         2 ei~v~~~~~~~~~~~~l~~~Fek~t-Gi~V-~~~~~~s~~l~~~i~~~-----aDv~~~~~~~~~~~~~~~~~~~~~~~~   74 (237)
T 2hxw_A            2 DVNLYGPGGPHTALKDIANKYSEKT-GVKV-NVNFGPQATWFEKAKKD-----ADILFGASDQSALAIASDFGKDFNVSK   74 (237)
T ss_dssp             CEEEEECSSTHHHHHHHHHHHHHHH-CCCE-EEEESSHHHHHHHHHHH-----CSEEEESSHHHHHHHHTTSGGGCCGGG
T ss_pred             EEEEEECCCCHHHHHHHHHHHHHHH-CCEE-EEEECCCHHHHHHHHCC-----CCEEEECCCHHHHHHHHHHCCCCCCCC
T ss_conf             7999947897899999999998801-9759-99977829999997659-----999998460478999886104677772


Q ss_pred             EEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCC-CCCCHHHHHHHH
Q ss_conf             6665215412554166654568888888764102555553236730232310011122450354488-542357899988
Q gi|254780707|r  107 EVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPS-GKHGTREVLEKK  185 (346)
Q Consensus       107 ~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~-~~SGT~~~F~~~  185 (346)
                      ..+++...+++++++.++..                         +++|.|+..  |+..+.+..+. +.+++.......
T Consensus        75 ~~~~~~~~~vl~~~~~~~~~-------------------------~~~~~dl~~--~~~~~~~~~~~~~~~~~~~~~~~~  127 (237)
T 2hxw_A           75 IKPLYFREAIILTQKGNPLK-------------------------IKGLKDLAN--KKVRIVVPEGAGKSNTSGTGVWED  127 (237)
T ss_dssp             CEEEEEEEEEEEESTTCTTC-------------------------CCSHHHHHH--SCCCEEECCCTTSSCCTTTTHHHH
T ss_pred             EEEEEEEEEEEEEECCCCCC-------------------------CCCHHHHHH--CCCEEEEECCCCCCCHHHHHHHHH
T ss_conf             79999432999997999767-------------------------652356642--031066513688732227999999


Q ss_pred             HCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf             51345556541011111013660001344431024664021166236777631015321001332001100111001344
Q gi|254780707|r  186 VLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNADVLKLVPI  265 (346)
Q Consensus       186 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~~~~~~~~~~  265 (346)
                      ........    ......     ..            ..+....+...+...+......+|..-..+...+..      .
T Consensus       128 ~~~~~~~~----~~~~~~-----~~------------~~~~~~~~~~~~~~~v~~g~~d~~i~~~~~a~~~~~------~  180 (237)
T 2hxw_A          128 MIGRTQDI----KTIQNF-----RN------------NIVAFVPNSGSARKLFAQDQADAWITWIDWSKSNPD------I  180 (237)
T ss_dssp             HHHTTCCH----HHHHHH-----HH------------TEEEECCCCTTC--CTTTTTCSEEEEEHHHHHHSTT------S
T ss_pred             HHHHHCCH----HHHHHH-----HC------------CCEEECCCHHHHHHHHHHCCCEEEEEEHHHHHCCCC------C
T ss_conf             86222208----899974-----35------------705865888999999970777099874454532666------0


Q ss_pred             CCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCHHHCCCCCHHHHCCCC
Q ss_conf             5767895560279875036789997078856688999999997498740522027755963
Q gi|254780707|r  266 DGIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVSDEMMAPDSQLFQYGLI  326 (346)
Q Consensus       266 ~~v~p~~~~i~~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~ls~~~~~~~~~~~~~Gyv  326 (346)
                      ..+.|     .++.|++.+++.+..+.+   ..++.++|++|++|+++|.   ++++.||=
T Consensus       181 ~~~~~-----~~~~~~~~~~~~i~~~~~---~~~~A~~Fi~fl~S~e~q~---i~~~~Gf~  230 (237)
T 2hxw_A          181 GTAVA-----IEKDLVVYRTFNVIAKEG---ASKETQDFIAYLSSKEAKE---IFKKYGWR  230 (237)
T ss_dssp             SEEEE-----CCTTTCCEEEEEEEECTT---CCHHHHHHHHHTTSHHHHH---HHHHTTCB
T ss_pred             EEEEE-----CCCCCCEEEEEEEECCCC---CHHHHHHHHHHHCCHHHHH---HHHHCCCC
T ss_conf             28996-----699852587799995899---9499999999978999999---99985998