HHsearch results for GI: 254780707 and protein with PDBid: 2hxw_A
>2hxw_A Major antigenic peptide PEB3; periplasmic binding protein, N-glycosylation, structural genomics; HET: FLC; 1.60A {Campylobacter jejuni} PDB: 3fjm_A 3fjg_A 3fir_A* 3fj7_A*
Probab=99.60 E-value=2.4e-14 Score=97.42 Aligned_cols=228 Identities=11% Similarity=0.106 Sum_probs=127.1
Q ss_pred EEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCE
Q ss_conf 79998034258999999999998779807999815762057898852101335301213320247678767624878724
Q gi|254780707|r 27 RIRIAGSSTLFPYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKHGVSDIQ 106 (346)
Q Consensus 27 ~I~i~GSst~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~~~~~~~ 106 (346)
.|+|-|+.++.|.++.+++.|++++ +++| .+..+||+...+++..| .|+..++.+....++..........-.
T Consensus 2 ei~v~~~~~~~~~~~~l~~~Fek~t-Gi~V-~~~~~~s~~l~~~i~~~-----aDv~~~~~~~~~~~~~~~~~~~~~~~~ 74 (237)
T 2hxw_A 2 DVNLYGPGGPHTALKDIANKYSEKT-GVKV-NVNFGPQATWFEKAKKD-----ADILFGASDQSALAIASDFGKDFNVSK 74 (237)
T ss_dssp CEEEEECSSTHHHHHHHHHHHHHHH-CCCE-EEEESSHHHHHHHHHHH-----CSEEEESSHHHHHHHHTTSGGGCCGGG
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHH-CCEE-EEEECCCHHHHHHHHCC-----CCEEEECCCHHHHHHHHHHCCCCCCCC
T ss_conf 7999947897899999999998801-9759-99977829999997659-----999998460478999886104677772
Q ss_pred EEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCC-CCCCHHHHHHHH
Q ss_conf 6665215412554166654568888888764102555553236730232310011122450354488-542357899988
Q gi|254780707|r 107 EVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPS-GKHGTREVLEKK 185 (346)
Q Consensus 107 ~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~-~~SGT~~~F~~~ 185 (346)
..+++...+++++++.++.. +++|.|+.. |+..+.+..+. +.+++.......
T Consensus 75 ~~~~~~~~~vl~~~~~~~~~-------------------------~~~~~dl~~--~~~~~~~~~~~~~~~~~~~~~~~~ 127 (237)
T 2hxw_A 75 IKPLYFREAIILTQKGNPLK-------------------------IKGLKDLAN--KKVRIVVPEGAGKSNTSGTGVWED 127 (237)
T ss_dssp CEEEEEEEEEEEESTTCTTC-------------------------CCSHHHHHH--SCCCEEECCCTTSSCCTTTTHHHH
T ss_pred EEEEEEEEEEEEEECCCCCC-------------------------CCCHHHHHH--CCCEEEEECCCCCCCHHHHHHHHH
T ss_conf 79999432999997999767-------------------------652356642--031066513688732227999999
Q ss_pred HCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 51345556541011111013660001344431024664021166236777631015321001332001100111001344
Q gi|254780707|r 186 VLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNADVLKLVPI 265 (346)
Q Consensus 186 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~~~~~~~~~~ 265 (346)
........ ...... .. ..+....+...+...+......+|..-..+...+.. .
T Consensus 128 ~~~~~~~~----~~~~~~-----~~------------~~~~~~~~~~~~~~~v~~g~~d~~i~~~~~a~~~~~------~ 180 (237)
T 2hxw_A 128 MIGRTQDI----KTIQNF-----RN------------NIVAFVPNSGSARKLFAQDQADAWITWIDWSKSNPD------I 180 (237)
T ss_dssp HHHTTCCH----HHHHHH-----HH------------TEEEECCCCTTC--CTTTTTCSEEEEEHHHHHHSTT------S
T ss_pred HHHHHCCH----HHHHHH-----HC------------CCEEECCCHHHHHHHHHHCCCEEEEEEHHHHHCCCC------C
T ss_conf 86222208----899974-----35------------705865888999999970777099874454532666------0
Q ss_pred CCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCHHHCCCCCHHHHCCCC
Q ss_conf 5767895560279875036789997078856688999999997498740522027755963
Q gi|254780707|r 266 DGIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVSDEMMAPDSQLFQYGLI 326 (346)
Q Consensus 266 ~~v~p~~~~i~~g~YPl~r~ly~yv~~~~~~~~~~~~~Fl~~~ls~~~~~~~~~~~~~Gyv 326 (346)
..+.| .++.|++.+++.+..+.+ ..++.++|++|++|+++|. ++++.||=
T Consensus 181 ~~~~~-----~~~~~~~~~~~~i~~~~~---~~~~A~~Fi~fl~S~e~q~---i~~~~Gf~ 230 (237)
T 2hxw_A 181 GTAVA-----IEKDLVVYRTFNVIAKEG---ASKETQDFIAYLSSKEAKE---IFKKYGWR 230 (237)
T ss_dssp SEEEE-----CCTTTCCEEEEEEEECTT---CCHHHHHHHHHTTSHHHHH---HHHHTTCB
T ss_pred EEEEE-----CCCCCCEEEEEEEECCCC---CHHHHHHHHHHHCCHHHHH---HHHHCCCC
T ss_conf 28996-----699852587799995899---9499999999978999999---99985998