HHSEARCH alignment of GI: 254780707 and SCOP domain: d1us5a_

Alignment

Probab=96.04  E-value=0.032  Score=28.58  Aligned_cols=62  Identities=19%  Similarity=0.286  Sum_probs=48.7

Q ss_pred             CCCEEEEEEC---CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCC
Q ss_conf             3767999803---42589999999999987798079998157620578988521013353012133202
Q gi|254780707|r   24 ARNRIRIAGS---STLFPYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKI   89 (346)
Q Consensus        24 a~~~I~i~GS---st~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l   89 (346)
                      |++.|+|+.+   ++-+++...+++.+.+..+++++.+..+.||..=++.+.+|.    +|+|.+.-..
T Consensus         1 a~~~l~i~tg~~gg~y~~~~~~la~~l~~~~~~i~~~~~~t~Gs~~Nl~~l~~g~----~d~a~~~~~~   65 (298)
T d1us5a_           1 AQEFITIGSGSTTGVYFPVATGIAKLVNDANVGIRANARSTGGSVANINAINAGE----FEMALAQNDI   65 (298)
T ss_dssp             CCEEEEEECCCTTSSHHHHHHHHHHHHHHHTSSEEEEEECCSCHHHHHHHHHTTS----CSEEEEEHHH
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCC----CEEEEECCHH
T ss_conf             9715999969998727999999999996058984899981788899999997799----6199955188

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Putative GluR0 ligand binding core
species: Thermus thermophilus [TaxId: 274]