HHSEARCH alignment of GI: 254780707 and SCOP domain: d1utha_

Alignment
>d1utha_ c.94.1.1 (A:) LysR-type regulatory protein DntR {Burkholderia sp. [TaxId: 36773]}
Probab=92.74  E-value=0.22  Score=23.94  Aligned_cols=89  Identities=9%  Similarity=0.020  Sum_probs=63.8

Q ss_pred             CCCCCCEEEEEECCHHHH-HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHH
Q ss_conf             201376799980342589-9999999999877980799981576205789885210133530121332024767876762
Q gi|254780707|r   21 GTFARNRIRIAGSSTLFP-YSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKK   99 (346)
Q Consensus        21 ~~~a~~~I~i~GSst~~P-~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~   99 (346)
                      ++.++.+|+|+=+.++.. ++..+...|.+.+|++++. +....+..-.+.+.+|.    +|+|....+....       
T Consensus         7 P~~~~~~~rI~~~~~~~~~~lp~ll~~f~~~~P~v~l~-i~~~~~~~~~~~l~~g~----~D~~i~~~~~~~~-------   74 (219)
T d1utha_           7 PFASTRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQIS-TLRPNAGNLKEDMESGA----VDLALGLLPELQT-------   74 (219)
T ss_dssp             TTTCCCEEEEECCHHHHHHHHHHHHHHHHHHCTTCEEE-EECTTSSCHHHHHHHTS----CCEEEECCTTCCT-------
T ss_pred             CCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEE-EEECCHHHHHHHHHCCC----CEEEEEECCCCCC-------
T ss_conf             56369789999727999999999999999988998899-99555787999986488----4056641245555-------


Q ss_pred             CCCCCCEEEEEECCCCEEEECCCCCC
Q ss_conf             48787246665215412554166654
Q gi|254780707|r  100 HGVSDIQEVTIGHDGILLVSDRDMVS  125 (346)
Q Consensus       100 ~~~~~~~~~~v~~d~i~i~~n~~~~~  125 (346)
                          .+...++..+..+++.....+.
T Consensus        75 ----~~~~~~l~~~~~~~~~~~~~~~   96 (219)
T d1utha_          75 ----GFFQRRLFRHRYVCMFRKDHPS   96 (219)
T ss_dssp             ----TEEEEEEEEECEEEEEETTCSS
T ss_pred             ----CCHHHHCCCCCCCCCCCCCCHH
T ss_conf             ----2012110000001012355155


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: LysR-type regulatory protein DntR
species: Burkholderia sp. [TaxId: 36773]