RPSBLAST alignment of GI: 254780707 and SCOP domain: d1twya_

Alignment

 Score = 95.4 bits (236), Expect = 6e-21
 Identities = 56/302 (18%), Positives = 109/302 (36%), Gaps = 54/302 (17%)

Query: 26  NRIRIAGSSTLFPYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNS 85
           + I I+GS+++     ++AE +++  PE     V+  GS+ G+    +G      DI  +
Sbjct: 1   SEITISGSTSVARIMDVLAEKYNQQHPETY-VAVQGVGSTAGISLLKKG----VADIAMT 55

Query: 86  SRKITQNELDECKKHGVSDIQEVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDD 145
           SR +T++E           +   T+  DG+ +V ++     +LT E LY      +    
Sbjct: 56  SRYLTESEAQNT-------LHTFTLAFDGLAIVVNQANPVTNLTREQLYGIYKGQITNWK 108

Query: 146 KVVFNPLKKWSEIRPDFPEVRIAIYVPSGKHGTREVLEKKVLQEGCVRSRNFSKMRDMFK 205
           +V  N  K               +       GTR   E  +     V+ R  S +     
Sbjct: 109 QVGGNDQKIA-------------VVTREASSGTRYSFESLMGLTKTVKDREVSDVAPT-- 153

Query: 206 YNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNADVLKLVPI 265
                             A+ V+ + +     +  N    GF+ +     +   ++    
Sbjct: 154 ------------------ALVVNSN-SMMKTLVNHNTQAVGFISIGSVDKSVKAIQ---F 191

Query: 266 DGIVPSMGTIVSGLYPISRPLLFYVKRQHFNSVLGLREYVSFSVSDEMMAPDSQLFQYGL 325
           +   P+   I    Y +SRP L      + +     +E+++F  S+        + +YG 
Sbjct: 192 EKADPTSDNIAKHTYQLSRPFLILHYSDNADE--QTKEFIAFLKSESAKK---LIVEYGY 246

Query: 326 IP 327
           I 
Sbjct: 247 IM 248

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: ABC transporter, periplasmic substrate-binding protein VCA0807
species: Vibrio cholerae [TaxId: 666]