HHsearch alignment for GI: 254780708 and conserved domain: pfam04279

>pfam04279 IspA Intracellular septation protein A.
Probab=100.00  E-value=0  Score=410.52  Aligned_cols=175  Identities=38%  Similarity=0.732  Sum_probs=170.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999860110001232122221479999999999999999999850878876899999999999988
Q gi|254780708|r   11 VCFLLEFSPGIAFWLCNFYGEKLFFYFPMLSNLGGIIFVSTLLFMVLTAVSLGMFWFFFREFRVIPVVSGVCVLVFGSLT   90 (204)
Q Consensus        11 mK~lle~~Pli~FFi~y~~~~~~~~~~~~~~~~~~~I~~AT~~li~at~i~~~~~~~~~kki~~~~~is~~lv~vfGglT   90 (204)
T Consensus         1 mk~l~d~~Pli~Ffi~y~~~~---------------I~~AT~~l~~at~i~~~~~~~~~k~i~~~~~is~~lv~vfGglT   65 (176)
T pfam04279         1 MKQLLDFGPLILFFVAYKYYG---------------IYVATAALIVATLLQLAILWILTGKVEKMQLITLVLVVVFGGLT   65 (176)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             928999988999999999936---------------99999999999999999999990985377999999999999999


Q ss_pred             HHHCCCCHHEEEHHHHHHHHHHHHHHHHH-HCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf             66187004243155999999999999998-28814899872037899799999889999999999999999999809558
Q gi|254780708|r   91 VWLRDESLIKMKPTFFYFVFSVVLFVGYL-SGKSFVRFFLSQVICLDSIGWRKLTLRWAFFFLFLSFCNEIVWRNFSTET  169 (204)
Q Consensus        91 l~f~d~~FIk~KpTIi~~~fA~~Ll~~~~-~~k~llk~ll~~~~~l~~~~W~~Lt~~w~~fF~~la~lN~~va~~~s~d~  169 (204)
T Consensus        66 l~~~d~~FIk~KPTIi~~~fA~~ll~s~~~~~k~llk~~l~~~~~l~~~~W~~Lt~~W~~fF~~~a~lN~~va~~~s~d~  145 (176)
T pfam04279        66 LWFHDDTFIKWKPTIIYWLFALALLGGLLFFKKPLLKRMLGKAIELPDEGWRKLNLRWALFFLFMAVLNEYVAFNFSTDT  145 (176)
T ss_pred             HHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf             99478503773189999999999998999668659999997246999999999999999999999999999999789044


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             8999989899999999999999994078884
Q gi|254780708|r  170 WIFFKAIGIFPIFLIFGIVQMNLINKHTILP  200 (204)
Q Consensus       170 WV~FK~fG~~~l~~if~~~q~~~l~k~~~~~  200 (204)
T Consensus       146 WV~FK~fG~~~lt~iF~i~q~~~l~k~~~~~  176 (176)
T pfam04279       146 WVNFKVFGLMGLTLVFTLAQGPYLYKHLLEE  176 (176)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             3343699989999999999999998657899