HHsearch alignment for GI: 254780709 and conserved domain: CHL00071
>CHL00071 tufA elongation factor Tu.
Probab=96.26 E-value=0.0081 Score=40.07 Aligned_cols=130 Identities=17% Similarity=0.266 Sum_probs=68.4
Q ss_pred CCCCCE-EECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 667412-3113544444247899999998522674267743451245688999997530353212235866124542289
Q gi|254780709|r 108 SHRPHV-ILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAF 186 (321)
Q Consensus 108 ~~~p~v-il~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~ 186 (321)
T Consensus 8 ~~k~~vni~~~GHVD~GKSTL~g~L~~~~~~~~~~~~~------~~~~~D~~~e-Er~rGiTi-------d~~~~----- 68 (409)
T CHL00071 8 RKKPHVNIGTIGHVDHGKTTLTAAITMTLAANGGAKGK------KYDEIDSAPE-EKARGITI-------NTAHV----- 68 (409)
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHH------HHHHCCCCHH-HHHCCCEE-------EECEE-----
T ss_conf 89986999999545883999999986453004513343------1553237976-87369448-------80248-----
Q ss_pred HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHH--HHHHHHHHHHHCCCCEEE--
Q ss_conf 9996514875998654333211577899998998763022234301123102335225--778999876435897699--
Q gi|254780709|r 187 KQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQN--ALRQVEMFHAVAGTTGLI-- 262 (321)
Q Consensus 187 ~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~--~~~~a~~F~~~~~~~g~I-- 262 (321)
T Consensus 69 -~~et~~~~~~~iD~PGH~~fv~nmi~G------------as~aD~alLVV~A~~G~~~QTkEHl~l-~~~lgV~~~IVa 134 (409)
T CHL00071 69 -EYETENRHYAHVDCPGHADYVKNMITG------------AAQMDGAILVVSAADGPMPQTKEHILL-AKQVGVPNIVVF 134 (409)
T ss_pred -EEECCCEEEEEEECCCHHHHHHHHHHH------------HCCCCCEEEEEECCCCCCCCHHHHHHH-HHHCCCCCEEEE
T ss_conf -996287599998679678999998752------------301581289998687885004999999-997399936555
Q ss_pred EECCCCCC
Q ss_conf 96545787
Q gi|254780709|r 263 MTKMDGTA 270 (321)
Q Consensus 263 ~TKlD~ta 270 (321)
T Consensus 135 vnKmD~v~ 142 (409)
T CHL00071 135 LNKEDQVD 142 (409)
T ss_pred EECCCCCC
T ss_conf 55679854