HHsearch alignment for GI: 254780709 and conserved domain: COG0378
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription].
Probab=98.63 E-value=1.1e-07 Score=74.15 Aligned_cols=172 Identities=26% Similarity=0.430 Sum_probs=125.7
Q ss_pred CCCCC-CEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCC-C--CCHHHH
Q ss_conf 36674-1231135444442478999999985226742677434512456889999975303532122358-6--612454
Q gi|254780709|r 107 FSHRP-HVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIG-S--DAAALA 182 (321)
Q Consensus 107 ~~~~p-~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~-~--dp~~v~ 182 (321)
T Consensus 8 ~~~~~~~~i~v~Gp~GSGKTaLie~~~~~L~~~-~~~aVI~~Di~t~~Da~~l~~~---~g~~i~~v~TG~~CH~da~m~ 83 (202)
T COG0378 8 EKNRPMLRIGVGGPPGSGKTALIEKTLRALKDE-YKIAVITGDIYTKEDADRLRKL---PGEPIIGVETGKGCHLDASMN 83 (202)
T ss_pred HHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH-CCEEEEECEEECHHHHHHHHHC---CCCEEEEECCCCCCCCCHHHH
T ss_conf 725864899961799867899999999999752-7768996404006559999737---798068740387658867889
Q ss_pred HHHHHHHHHH--CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHH--HHHHHHHCCC
Q ss_conf 2289999651--48759986543332115778999989987630222343011231023352257789--9987643589
Q gi|254780709|r 183 YEAFKQAQAK--KVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALRQ--VEMFHAVAGT 258 (321)
Q Consensus 183 ~~a~~~a~~~--~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~~~~--a~~F~~~~~~ 258 (321)
T Consensus 84 ~~ai~~l~~~~~~~Dll~iEs~GNL~~~~s--p~L~-------------d~~~v~VidvteGe~~P~K~gP~i~~----a 144 (202)
T COG0378 84 LEAIEELVLDFPDLDLLFIESVGNLVCPFS--PDLG-------------DHLRVVVIDVTEGEDIPRKGGPGIFK----A 144 (202)
T ss_pred HHHHHHHHHCCCCCCEEEEECCCCEECCCC--CCHH-------------HCEEEEEEECCCCCCCCCCCCCCEEE----E
T ss_conf 999999863177677899923764324468--0413-------------04699999878888876557996467----4
Q ss_pred CEEEEECCCCCCCHHHHHHHHH------HHCCCEEEEE--CCCCCCCCCCC
Q ss_conf 7699965457870699999999------9769889997--58981325557
Q gi|254780709|r 259 TGLIMTKMDGTARGGGLIPIVV------THKIPVYFLG--VGEGINDLEPF 301 (321)
Q Consensus 259 ~g~I~TKlD~ta~~G~~ls~~~------~~~~Pi~fig--~Ge~i~Dl~~f 301 (321)
T Consensus 145 DllVInK~DLa~~v~~dlevm~~da~~~np~~~ii~~n~ktg~G~~~~~~~ 195 (202)
T COG0378 145 DLLVINKTDLAPYVGADLEVMARDAKEVNPEAPIIFTNLKTGEGLDEWLRF 195 (202)
T ss_pred EEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH
T ss_conf 189985677387728669999999998499998899847878689999999