HHsearch alignment for GI: 254780709 and conserved domain: COG0455
>COG0455 flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility].
Probab=97.90 E-value=0.00055 Score=48.31 Aligned_cols=164 Identities=21% Similarity=0.257 Sum_probs=87.8
Q ss_pred CCEEECC-CCCCCCHHHHHHHH-HHHHHHCCCCEEEEECCCCCHHH----------------------HHHHHHHHHHHC
Q ss_conf 4123113-54444424789999-99985226742677434512456----------------------889999975303
Q gi|254780709|r 111 PHVILVV-GVNGVGKTTVIGKL-SKKMSDAGLKVMLAAGDTFRSAA----------------------IDQLKIWADRTS 166 (321)
Q Consensus 111 p~vil~v-G~nG~GKTTT~aKL-A~~~~~~g~kV~lva~DtfR~aA----------------------~eQL~~~a~~~~ 166 (321)
T Consensus 2 ~~~Iav~SgKGGvGKTtitanlga~~~~~~~k~V~~iDaD~g~~nL~~~~g~~~~~~~l~dvL~~~~~~~Di~~~~~~~g 81 (262)
T COG0455 2 TKVIAVVSGKGGVGKTTITANLGAALAALGGKVVLLIDADLGLGNLSLLLGVESKPTTLHDVLAGEASIEDIIYETPQDG 81 (262)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCCCCCCHHHHHHCCCCHHHEEEECCCCC
T ss_conf 78999984588756898998699999964897699996588887288885888885509999707787768023157689
Q ss_pred CCCCCCCCCCCCHHHHH------HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf 53212235866124542------289999651487599865433321157789999899876302223430112310233
Q gi|254780709|r 167 ADFVCSEIGSDAAALAY------EAFKQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDAT 240 (321)
Q Consensus 167 v~~~~~~~~~dp~~v~~------~a~~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~ 240 (321)
T Consensus 82 l~vipg~~~--~~~~~~~~~~~~~~~~~~l~~~~D~iliD~~aGl~~~~--~~~~~-----------~-sd~~viVt~pe 145 (262)
T COG0455 82 LYVLPGGSG--LEDLAKLDPEDLEDVIKELEELYDYILIDTGAGLSRDT--LSFIL-----------S-SDELVIVTTPE 145 (262)
T ss_pred EEEEECCCC--HHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHH--HHHHH-----------H-CCCEEEEECCC
T ss_conf 899607887--68886169888999999987529999996899966888--99987-----------3-68179992798
Q ss_pred C--CHHHHHHHHH-HHHHCCCCE--EEEECCCCCCCH----HHHHHHHHHHCCCEEEEEC
Q ss_conf 5--2257789998-764358976--999654578706----9999999997698899975
Q gi|254780709|r 241 T--GQNALRQVEM-FHAVAGTTG--LIMTKMDGTARG----GGLIPIVVTHKIPVYFLGV 291 (321)
Q Consensus 241 ~--gq~~~~~a~~-F~~~~~~~g--~I~TKlD~ta~~----G~~ls~~~~~~~Pi~fig~ 291 (321)
T Consensus 146 ~~si~~A~~~i~~~~~~~~~~~~~~vV~N~v~~~~e~~~~~~~~~~~~~~~~-~~~~i~~ 204 (262)
T COG0455 146 PTSITDAYKTIKILSKLGLDLLGRRVVLNRVRSTKEGVDVAALLIQVVKQVP-VLQVIPF 204 (262)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC-CEEEECC
T ss_conf 5208999999999997387643315899703666654678999999997077-4347156