HHsearch alignment for GI: 254780709 and conserved domain: COG0486
>COG0486 ThdF Predicted GTPase [General function prediction only].
Probab=96.87 E-value=0.0017 Score=44.85 Aligned_cols=174 Identities=16% Similarity=0.231 Sum_probs=91.5
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 99998785201001210001366741231135444442478999999985226742677434512456889999975303
Q gi|254780709|r 87 DVSELIHKMLMPLSKPFNWDFSHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTS 166 (321)
Q Consensus 87 ~l~~~L~~~L~~~~~~~~~~~~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~ 166 (321)
T Consensus 196 ~~~~~l~~ll~~~~~g~il---r~G~kvvIiG~PNvGKSSLLNaL----~~--~d~AIVT-------------------d 247 (454)
T COG0486 196 ELIAELDELLATAKQGKIL---REGLKVVIIGRPNVGKSSLLNAL----LG--RDRAIVT-------------------D 247 (454)
T ss_pred HHHHHHHHHHHHHHHHHHH---HCCCEEEEECCCCCCHHHHHHHH----HC--CCCEEEC-------------------C
T ss_conf 9999999999744421366---45864999879988679999988----66--7866742-------------------8
Q ss_pred CCCCCCCCCCCCHHHHHHHHHH-HHHHCCCEEEEECCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHH
Q ss_conf 5321223586612454228999-965148759986543-33211577899998998763022234301123102335225
Q gi|254780709|r 167 ADFVCSEIGSDAAALAYEAFKQ-AQAKKVDVLIIDTAG-RLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQN 244 (321)
Q Consensus 167 v~~~~~~~~~dp~~v~~~a~~~-a~~~~~DvvliDTAG-R~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~ 244 (321)
T Consensus 248 I------~GT-----TRDviee~i~i~G~pv~l~DTAGiRet~d~V---E~iGIeRs~~~i~--~ADlvL~v~D~~~~~~ 311 (454)
T COG0486 248 I------AGT-----TRDVIEEDINLNGIPVRLVDTAGIRETDDVV---ERIGIERAKKAIE--EADLVLFVLDASQPLD 311 (454)
T ss_pred C------CCC-----CCCEEEEEEEECCEEEEEEECCCCCCCCCHH---HHHHHHHHHHHHH--HCCEEEEEEECCCCCC
T ss_conf 9------997-----4103789999898899998567766673489---9999999999998--5998999970887776
Q ss_pred HHHHHHHHHHHCCC---CEEEEECCCCCCCH-HHHHHHHHHHCCCEEEEEC--CCCCCCCCCCCHHHHHH
Q ss_conf 77899987643589---76999654578706-9999999997698899975--89813255577899999
Q gi|254780709|r 245 ALRQVEMFHAVAGT---TGLIMTKMDGTARG-GGLIPIVVTHKIPVYFLGV--GEGINDLEPFVAKDFSA 308 (321)
Q Consensus 245 ~~~~a~~F~~~~~~---~g~I~TKlD~ta~~-G~~ls~~~~~~~Pi~fig~--Ge~i~Dl~~f~~~~~~~ 308 (321)
T Consensus 312 ~~d~~--~~~~~~~~~~~i~v~NK~DL~~~~~~~~~--~~~~~~~~i~iSa~t~~Gl~~L~~~i~~~~~~ 377 (454)
T COG0486 312 KEDLA--LIELLPKKKPIIVVLNKADLVSKIELESE--KLANGDAIISISAKTGEGLDALREAIKQLFGK 377 (454)
T ss_pred HHHHH--HHHHCCCCCCEEEEEECHHCCCCCCCCHH--HCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 01177--88724368977999960211564321012--02678826999825765799999999999863