HHsearch alignment for GI: 254780709 and conserved domain: COG1102

Probab=95.62  E-value=0.01  Score=39.40  Aligned_cols=79  Identities=28%  Similarity=0.419  Sum_probs=46.6

Q ss_pred             EEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC--CCCCCCCCCHH-HHHHHHHHH
Q ss_conf             231135444442478999999985226742677434512456889999975303532--12235866124-542289999
Q gi|254780709|r  113 VILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADF--VCSEIGSDAAA-LAYEAFKQA  189 (321)
Q Consensus       113 vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~--~~~~~~~dp~~-v~~~a~~~a  189 (321)
T Consensus         2 ~ItIsG~pGsG~TTva~~lAe~~gl----~~vsaG~iFR~~A~e--------~gmsl~ef~~~AE~~p~iD~~iD~rq~e   69 (179)
T COG1102           2 VITISGLPGSGKTTVARELAEHLGL----KLVSAGTIFREMARE--------RGMSLEEFSRYAEEDPEIDKEIDRRQKE   69 (179)
T ss_pred             EEEECCCCCCCCHHHHHHHHHHHCC----CEEECCHHHHHHHHH--------CCCCHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             7996179999702799999998297----156212799999998--------3999999999875192166998899999


Q ss_pred             HHHCCCEEEEECCCCCC
Q ss_conf             65148759986543332
Q gi|254780709|r  190 QAKKVDVLIIDTAGRLH  206 (321)
Q Consensus       190 ~~~~~DvvliDTAGR~~  206 (321)
T Consensus        70 ~a~~~nvVl---egrLA   83 (179)
T COG1102          70 LAKEGNVVL---EGRLA   83 (179)
T ss_pred             HHHCCCEEE---HHHHH
T ss_conf             987289587---00457