HHsearch alignment for GI: 254780709 and conserved domain: COG1618

Probab=97.66  E-value=5.6e-05  Score=55.22  Aligned_cols=102  Identities=25%  Similarity=0.333  Sum_probs=59.0

Q ss_pred             CCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH---------H-----HHHHHHH-HHHCCCCCCCCCC
Q ss_conf             41231135444442478999999985226742677434512456---------8-----8999997-5303532122358
Q gi|254780709|r  111 PHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAA---------I-----DQLKIWA-DRTSADFVCSEIG  175 (321)
Q Consensus       111 p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA---------~-----eQL~~~a-~~~~v~~~~~~~~  175 (321)
T Consensus         5 ~mki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gGkR~GF~Ivdl~tg~~~~la~~~~~~~rvGkY~V~v-   83 (179)
T COG1618           5 AMKIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGGKRIGFKIVDLATGEEGILARVGFSRPRVGKYGVNV-   83 (179)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEH-
T ss_conf             4599986799845899999999999855966513983114208827515999814795579888478876210478627-


Q ss_pred             CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH
Q ss_conf             661245422899996514875998654333211577899
Q gi|254780709|r  176 SDAAALAYEAFKQAQAKKVDVLIIDTAGRLHNNSILMAG  214 (321)
Q Consensus       176 ~dp~~v~~~a~~~a~~~~~DvvliDTAGR~~~~~~lm~E  214 (321)
T Consensus        84 ~~le~i~~~al~rA~~~-aDvIIIDEIGpMElks~~f~~  121 (179)
T COG1618          84 EGLEEIAIPALRRALEE-ADVIIIDEIGPMELKSKKFRE  121 (179)
T ss_pred             HHHHHHHHHHHHHHHHC-CCEEEEECCCCHHHCCHHHHH
T ss_conf             88899868999988634-998999433633020088999