HHsearch alignment for GI: 254780709 and conserved domain: COG1663

>COG1663 LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane].
Probab=95.55  E-value=0.027  Score=36.41  Aligned_cols=84  Identities=27%  Similarity=0.358  Sum_probs=51.4

Q ss_pred             CCEEECCC---CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC----------------HHHHHHHHHHHHHHCCCCCC
Q ss_conf             41231135---444442478999999985226742677434512----------------45688999997530353212
Q gi|254780709|r  111 PHVILVVG---VNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFR----------------SAAIDQLKIWADRTSADFVC  171 (321)
Q Consensus       111 p~vil~vG---~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR----------------~aA~eQL~~~a~~~~v~~~~  171 (321)
T Consensus        46 pvPVI~VGNltvGGtGKTP~vi~la~~l~~rG~~~gvvSRGYgg~~~~~~~~~~~~~~a~~~GDEPl-LlA~~t~~pv~v  124 (336)
T COG1663          46 PVPVICVGNLTVGGTGKTPVVIWLAEALQARGVRVGVVSRGYGGKLKVVPLVDNIHTTAAEVGDEPL-LLARRTGAPVAV  124 (336)
T ss_pred             CCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCHHH-HHHHHCCCCEEE
T ss_conf             8878998557777899688999999999866973679805768887654102567678677284688-875533996898


Q ss_pred             CCCCCCCHHHHHHHHHHHHH--HCCCEEEEECC
Q ss_conf             23586612454228999965--14875998654
Q gi|254780709|r  172 SEIGSDAAALAYEAFKQAQA--KKVDVLIIDTA  202 (321)
Q Consensus       172 ~~~~~dp~~v~~~a~~~a~~--~~~DvvliDTA  202 (321)
T Consensus       125 ~~~R-------~~~~~~l~~~~~~~diIi~DDG  150 (336)
T COG1663         125 SPDR-------KDAAKALLAAHLGCDIIVLDDG  150 (336)
T ss_pred             EHHH-------HHHHHHHHHHCCCCCEEEECCC
T ss_conf             6429-------8999999851789899997674