HHsearch alignment for GI: 254780709 and conserved domain: COG1797

Probab=96.90  E-value=0.014  Score=38.50  Aligned_cols=164  Identities=23%  Similarity=0.291  Sum_probs=87.5

Q ss_pred             EECCCC-CCCCHHHHHHHHHHHHHHCCCCEEE--EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCH----HHHHHHH
Q ss_conf             311354-4444247899999998522674267--74345124568899999753035321223586612----4542289
Q gi|254780709|r  114 ILVVGV-NGVGKTTVIGKLSKKMSDAGLKVML--AAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAA----ALAYEAF  186 (321)
Q Consensus       114 il~vG~-nG~GKTTT~aKLA~~~~~~g~kV~l--va~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~----~v~~~a~  186 (321)
T Consensus         3 vvIAg~~SG~GKTTvT~glm~aL~~rg~~VqpfKvGPDYIDP~------~H~~atG~~sr----NLD~~mm~~~~v~~~f   72 (451)
T COG1797           3 VVIAGTSSGSGKTTVTLGLMRALRRRGLKVQPFKVGPDYIDPG------YHTAATGRPSR----NLDSWMMGEEGVRALF   72 (451)
T ss_pred             EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH------HHHHHHCCCCC----CCCHHHCCHHHHHHHH
T ss_conf             5995488888589999999999986687216655687863813------56676388567----7765446998999999


Q ss_pred             HHHHHHCCCEEEEECC-----CCCC-CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC-CHHHHHHHHHH---HHHC
Q ss_conf             9996514875998654-----3332-11577899998998763022234301123102335-22577899987---6435
Q gi|254780709|r  187 KQAQAKKVDVLIIDTA-----GRLH-NNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATT-GQNALRQVEMF---HAVA  256 (321)
Q Consensus       187 ~~a~~~~~DvvliDTA-----GR~~-~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~-gq~~~~~a~~F---~~~~  256 (321)
T Consensus        73 ~~-~~~~adi~vIEGVMGLfDG~~~~~~~gSTA~lAk~l---~-------~PVvLVid~~~~s~S~AAiv~G~~~fdp~v  141 (451)
T COG1797          73 AR-AAADADIAVIEGVMGLFDGRGSATDTGSTADLAKLL---G-------APVVLVVDASGLSRSVAAIVKGFKHFDPDV  141 (451)
T ss_pred             HH-HCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHH---C-------CCEEEEEECCCHHHHHHHHHHHHHHCCCCC
T ss_conf             98-627898799961230236887776777799999985---9-------998999957522578999998898619988


Q ss_pred             CCCEEEEECCCCCCCHHHHHHHHHH-HCCCEEEEECCCCCCCCCC
Q ss_conf             8976999654578706999999999-7698899975898132555
Q gi|254780709|r  257 GTTGLIMTKMDGTARGGGLIPIVVT-HKIPVYFLGVGEGINDLEP  300 (321)
Q Consensus       257 ~~~g~I~TKlD~ta~~G~~ls~~~~-~~~Pi~fig~Ge~i~Dl~~  300 (321)
T Consensus       142 ~iaGVIlNrVgserH~~llr~Ale~~~gv~--vlG~lpr~~~l~l  184 (451)
T COG1797         142 NIAGVILNRVGSERHYELLRDALEEYTGVP--VLGYLPRDDDLEL  184 (451)
T ss_pred             CEEEEEEECCCCHHHHHHHHHHHHHCCCCC--EEEEECCCCCCCC
T ss_conf             257899724777889999998755327985--7987427855678