HHsearch alignment for GI: 254780709 and conserved domain: PRK00049
>PRK00049 elongation factor Tu; Reviewed.
Probab=95.49 E-value=0.076 Score=33.27 Aligned_cols=129 Identities=18% Similarity=0.238 Sum_probs=68.4
Q ss_pred CCCC-EEECCCCCCCCHHHHHHHHHHHHHH-CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 6741-2311354444424789999999852-2674267743451245688999997530353212235866124542289
Q gi|254780709|r 109 HRPH-VILVVGVNGVGKTTVIGKLSKKMSD-AGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAF 186 (321)
Q Consensus 109 ~~p~-vil~vG~nG~GKTTT~aKLA~~~~~-~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~ 186 (321)
T Consensus 9 ~kp~~ni~~~GHVD~GKSTL~g~Lt~~l~~~~g~~~~~~~~~------~D~~~eEr~r-GiTi-------d~~~~~---- 70 (397)
T PRK00049 9 TKPHVNVGTIGHVDHGKTTLTAAITKVLAKKYGGAEAKAYDQ------IDNAPEEKAR-GITI-------NTAHVE---- 70 (397)
T ss_pred CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH------CCCCHHHHHC-CCEE-------EEEEEE----
T ss_conf 998329999912588899999999866665438531001333------0257667625-8169-------987999----
Q ss_pred HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHH--HHHHHHHHHHHCCCCEEE--
Q ss_conf 9996514875998654333211577899998998763022234301123102335225--778999876435897699--
Q gi|254780709|r 187 KQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQN--ALRQVEMFHAVAGTTGLI-- 262 (321)
Q Consensus 187 ~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~--~~~~a~~F~~~~~~~g~I-- 262 (321)
T Consensus 71 --~~t~~~~~~~iD~PGH----~~fi------knmI~--Ga~~~D~alLVV~A~~G~~~QT~EHl~-l~~~LGv~~~iV~ 135 (397)
T PRK00049 71 --YETEKRHYAHVDCPGH----ADYV------KNMIT--GAAQMDGAILVVSAADGPMPQTREHIL-LARQVGVPYIVVF 135 (397)
T ss_pred --EECCCCEEEEECCCCH----HHHH------HHHHH--HHCCCCEEEEEEECCCCCCHHHHHHHH-HHHHHCCCEEEEE
T ss_conf --9728814999517863----8889------99873--012156799999748886652899999-9998099827999
Q ss_pred EECCCCCC
Q ss_conf 96545787
Q gi|254780709|r 263 MTKMDGTA 270 (321)
Q Consensus 263 ~TKlD~ta 270 (321)
T Consensus 136 vnK~D~v~ 143 (397)
T PRK00049 136 LNKCDMVD 143 (397)
T ss_pred EECCCCCC
T ss_conf 98668888