HHsearch alignment for GI: 254780709 and conserved domain: PRK00093

Probab=97.60  E-value=0.0019  Score=44.43  Aligned_cols=171  Identities=23%  Similarity=0.302  Sum_probs=85.5

Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf             99999878520100121000136674123113544444247899999998522674267743451245688999997530
Q gi|254780709|r   86 YDVSELIHKMLMPLSKPFNWDFSHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRT  165 (321)
Q Consensus        86 ~~l~~~L~~~L~~~~~~~~~~~~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~  165 (321)
T Consensus       152 ~~L~~~i~~~l~~~~-----~~~~~~iriaiiGrpNvGKStl~N~l----l~~~r~--iv----------------s~~~  204 (438)
T PRK00093        152 GDLLDAILELLPEEE-----EEEEDPIKIAIIGRPNVGKSTLINAL----LGEERV--IV----------------SDIA  204 (438)
T ss_pred             HHHHHHHHHHCCCCC-----CCCCCCEEEEEECCCCCCHHHHHHHH----HHHHHH--HC----------------CCCC
T ss_conf             999999985488554-----34455605999558886556788876----543332--04----------------7999


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCC---CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
Q ss_conf             353212235866124542289999651487599865433---32115778999989987630222343011231023352
Q gi|254780709|r  166 SADFVCSEIGSDAAALAYEAFKQAQAKKVDVLIIDTAGR---LHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTG  242 (321)
Q Consensus       166 ~v~~~~~~~~~dp~~v~~~a~~~a~~~~~DvvliDTAGR---~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~g  242 (321)
T Consensus       205 Gt-------TrD~i~~~~------~~~~~~~~~iDTaGirkk~k~~~~-i-E~~s~~~t~~~i~--~~dvvilviDa~~~  267 (438)
T PRK00093        205 GT-------TRDSIDTPF------ERDGQKYTLIDTAGIRRRGKVTEG-I-EKYSVIRTLKAIE--RADVVLLVIDATEG  267 (438)
T ss_pred             CC-------CCCCEEEEE------EECCCEEEEEECCCCCCCCCCCHH-H-HHHHHHHHHHHHH--HCCEEEEEEECCCC
T ss_conf             85-------112326799------989967999989898765642137-8-8999999999986--44669999976658


Q ss_pred             HH--HHHHHHHHHHHCCCCEEEEECCCCCCCHHHH---------HHHHHHHCCCEEEEEC--CCCCCCCCC
Q ss_conf             25--7789998764358976999654578706999---------9999997698899975--898132555
Q gi|254780709|r  243 QN--ALRQVEMFHAVAGTTGLIMTKMDGTARGGGL---------IPIVVTHKIPVYFLGV--GEGINDLEP  300 (321)
Q Consensus       243 q~--~~~~a~~F~~~~~~~g~I~TKlD~ta~~G~~---------ls~~~~~~~Pi~fig~--Ge~i~Dl~~  300 (321)
T Consensus       268 ~~~qD~~i~~~i~~~gk~~ii~vNKwDLv~~~~~~~~~~~~~i~~~l~~~~~~pIvfiSA~~g~gi~kl~~  338 (438)
T PRK00093        268 ITEQDLRIAGLALEAGRALVIVVNKWDLVEKDSKTMEEVKEELRRRLPFLDFAPIVFISALTGQGVDKLFE  338 (438)
T ss_pred             CCHHHHHHHHHHHHCCCCEEEEEECHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHH
T ss_conf             84888999999998199669999702225663899999999999756125898779985147779999999