HHsearch alignment for GI: 254780709 and conserved domain: PRK00300

Probab=95.40  E-value=0.034  Score=35.71  Aligned_cols=88  Identities=23%  Similarity=0.306  Sum_probs=48.6

Q ss_pred             CCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEE---EECCCCCHHH-------------HHHHHHHHHHHCC-CCCC
Q ss_conf             674123113544444247899999998522674267---7434512456-------------8899999753035-3212
Q gi|254780709|r  109 HRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVML---AAGDTFRSAA-------------IDQLKIWADRTSA-DFVC  171 (321)
Q Consensus       109 ~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~l---va~DtfR~aA-------------~eQL~~~a~~~~v-~~~~  171 (321)
T Consensus         5 ~~g~livisGPSG~GK~tl~~~L~~~~p~---~~~~~vs~TTR~pR~~E~dG~dY~Fvs~eeF~~~i~~g~FlE~~~~~g   81 (208)
T PRK00300          5 RRGLLIVLSAPSGAGKSTLVRALLERDPN---DLQLSVSATTRAPRPGEVDGVHYHFVSREEFEEMIENGEFLEWAEVFG   81 (208)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHCCC---CEEEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHCCCEEEEEECC
T ss_conf             18838999999988999999999972998---689989746889899877896579961999999986283667899838


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCEEE-EECCCC
Q ss_conf             235866124542289999651487599-865433
Q gi|254780709|r  172 SEIGSDAAALAYEAFKQAQAKKVDVLI-IDTAGR  204 (321)
Q Consensus       172 ~~~~~dp~~v~~~a~~~a~~~~~Dvvl-iDTAGR  204 (321)
T Consensus        82 ~~YGT~-----~~~I~~~~~~G~~vildidvqGa  110 (208)
T PRK00300         82 NYYGTP-----REPVEEALAAGKDVLLEIDWQGA  110 (208)
T ss_pred             CCEECC-----HHHHHHHHHCCCCEEEECCHHHH
T ss_conf             703524-----69999998569987974678999