HHsearch alignment for GI: 254780709 and conserved domain: PRK00313

>PRK00313 lpxK tetraacyldisaccharide 4'-kinase; Provisional.
Probab=97.29  E-value=0.0021  Score=44.26  Aligned_cols=78  Identities=23%  Similarity=0.293  Sum_probs=51.1

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC----------------CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
Q ss_conf             35444442478999999985226742677434----------------51245688999997530353212235866124
Q gi|254780709|r  117 VGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGD----------------TFRSAAIDQLKIWADRTSADFVCSEIGSDAAA  180 (321)
Q Consensus       117 vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~D----------------tfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~  180 (321)
T Consensus        59 itvGGTGKTP~v~~La~~L~~~G~~~~IiSRGYg~~~~~~~~~v~~~~~~~~vGDEpl-lla~~~~~pV~V~~~R-----  132 (332)
T PRK00313         59 ITVGGTGKTPLILWLIEHCRRRGLRVGVVSRGYGARPPQLPWRVTADQDAAEAGDEPL-LIVQRTGVPLMIDPDR-----  132 (332)
T ss_pred             EEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCCCHHHCCCHHH-HHHHCCCCCEEECCCH-----
T ss_conf             7358877779999999999977996589864656766677355457768455585889-9985069629980769-----


Q ss_pred             HHHHHHHHHHH-HCCCEEEEECC
Q ss_conf             54228999965-14875998654
Q gi|254780709|r  181 LAYEAFKQAQA-KKVDVLIIDTA  202 (321)
Q Consensus       181 v~~~a~~~a~~-~~~DvvliDTA  202 (321)
T Consensus       133 --~~a~~~l~~~~~~dviIlDDG  153 (332)
T PRK00313        133 --PRAVQALLAAEPLDLILSDDG  153 (332)
T ss_pred             --HHHHHHHHHCCCCCEEEECCC
T ss_conf             --999999996499988995585