HHsearch alignment for GI: 254780709 and conserved domain: PRK00411
>PRK00411 cdc6 cell division control protein 6; Reviewed.
Probab=96.88 E-value=0.0098 Score=39.52 Aligned_cols=105 Identities=17% Similarity=0.212 Sum_probs=56.5
Q ss_pred CCCCEEECCCCCCCCHHHHHHHHHHHHHHCCC--CEEEEECCCCCHHHHHHHHHHHHHH-CCCCCCCCCCCCCHHHHHHH
Q ss_conf 67412311354444424789999999852267--4267743451245688999997530-35321223586612454228
Q gi|254780709|r 109 HRPHVILVVGVNGVGKTTVIGKLSKKMSDAGL--KVMLAAGDTFRSAAIDQLKIWADRT-SADFVCSEIGSDAAALAYEA 185 (321)
Q Consensus 109 ~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~--kV~lva~DtfR~aA~eQL~~~a~~~-~v~~~~~~~~~dp~~v~~~a 185 (321)
T Consensus 53 ~~~~n~~I~G~pGTGKT~~vk~v~~~l~~~~~~~~~vyINc~~~~t~~-~i~~~i~~~L~~~~~---p~~G~s~~~~~~~ 128 (394)
T PRK00411 53 SRPSNVLILGPPGTGKTTTVKKVFEELEEAALKVVYVYINCQIDRTRY-AILSEIARSLFGHPP---PSSGLSFDELFDK 128 (394)
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH-HHHHHHHHHHCCCCC---CCCCCCHHHHHHH
T ss_conf 999847998899998999999999999974689659999696689899-999999999569989---8778789999999
Q ss_pred HHHHHHH--CCCEEEEECCCCCCCH--HHHHHHHHH
Q ss_conf 9999651--4875998654333211--577899998
Q gi|254780709|r 186 FKQAQAK--KVDVLIIDTAGRLHNN--SILMAGIGK 217 (321)
Q Consensus 186 ~~~a~~~--~~DvvliDTAGR~~~~--~~lm~EL~k 217 (321)
T Consensus 129 l~~~l~~~~~~~ivvLDEiD~L~~~~~~~vLY~L~r 164 (394)
T PRK00411 129 IAEYLDERDRVLIVALDDINYLVEKEGNDVLYSLLR 164 (394)
T ss_pred HHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 999861669758999965540203665089999985