HHsearch alignment for GI: 254780709 and conserved domain: PRK00652

>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed.
Probab=97.14  E-value=0.0036  Score=42.54  Aligned_cols=78  Identities=27%  Similarity=0.306  Sum_probs=53.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC----------------CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
Q ss_conf             354444424789999999852267426774345----------------1245688999997530353212235866124
Q gi|254780709|r  117 VGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDT----------------FRSAAIDQLKIWADRTSADFVCSEIGSDAAA  180 (321)
Q Consensus       117 vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~Dt----------------fR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~  180 (321)
T Consensus        57 itvGGtGKTP~v~~la~~l~~~g~~~~IlSRGYg~~~~~~~~v~~~~~~~~~vGDEpll-la~~~~~~v~V~~~R-----  130 (334)
T PRK00652         57 LTVGGNGKTPVVIWLAEQLQARGVKVGVVSRGYGGKSKGYPLVLPADTTAAEVGDEPVL-IAQRTGAPVAVSPDR-----  130 (334)
T ss_pred             EEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCHHHCCCHHHH-HHHCCCCCEEEECCH-----
T ss_conf             88788777999999999999769936787346676567872761799983551868999-851789839995668-----


Q ss_pred             HHHHHHHHHHHHCCCEEEEECC
Q ss_conf             5422899996514875998654
Q gi|254780709|r  181 LAYEAFKQAQAKKVDVLIIDTA  202 (321)
Q Consensus       181 v~~~a~~~a~~~~~DvvliDTA  202 (321)
T Consensus       131 --~~~~~~l~~~~~dviIlDDG  150 (334)
T PRK00652        131 --VKAIKALLALGADIIILDDG  150 (334)
T ss_pred             --HHHHHHHHHCCCCEEEECCC
T ss_conf             --99999999659999997476